Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02398 ATGGCTTCCTCTGCCGAACGCGATAACCCAAGATCTGCAAAAAGAGTTGCTGTTGTTGGTGCCGGGGTAAGTGGGCTTGCTGCGGCTTACACATTGAAATCACATGGTCTGGATGTCACTGTATTCGAAGCTGAAGCAAGAGCTGGTGGGAGGTTAAAAAGTGTCTCACATGATGGTCTGGTTTGGGATGAGGGAGCTAATACAATGACTGCAAGTGAATTGGAGGTTAAAGAATTGATTGAAGCTCTTGGCCTTCAAGGAAAGCAACAGTTTCCAAACTCACAGCATAAGCGCTATATTGCAAAAAACGGTAAACCGGTTCTGGTACCAACAAATCCTGCTGCACTACTGAAGACGCAACTCCTGTCTGCACGCTCAAAGATCCAGCTAATTTTTGAACCATTTATGTGGAAGAGAAGTGACCCCTCTAGAGTGTGCGATGAAAATTACACAGAAAGTGTTGGTAGTTTCTTTGAACGTCATTTTGGGCAAGAGGTCGTGGACTATCTTATTGATCCTTTTGTAGGTGGTACAAGTGCAGCAGATCCGGAATCTCTTTCTGTGAAACATCATTTTTATTTATATATTTTGAGTAATGTGTACCCTATACGTTTCAGGTTCGGCTCCATTATAGCTGGAGCTTTTAAGTCAAAGTTATTTTCTAAACCGGATAAAACTAGTCAAAGGAAGGTAAAGGTCGCATCAAGAAAAGACAAGCACAAGCGTGGTTCATTTTCTTTCTTGGGTGGGATGCAGACACTGACTGATGCATTGTGCAAAGAGCTCGGTCAAGATGACCTTAAATTAAATTCAAAGGTTTTGACATTAGCGTACAATCATGATGGAAGTTCTTCATCACAAAATTGGTCTATTTCTTGTGCTTCCAACCAAAACATAGAAGCTGTTGATGCTGTAATTATGACGGCTCCCCTATGTAATGTCAAAGAGATGAAGATCACAAAAAGGGCAACCCCGTTCCCACTTAATTTTCTTCCTGAGGTGACCTATGTGCCACTCTCAGTCATAATCACCACCTTTAGAAAGGAGAATGTTAAGAGACCCCTTGAGGGATTTGGAGTTCTTGTTCCTTCAAAAGAGCAACAAAATGGTTTAAAAACTCTTGGTACACTTTTTTCCTCTATGATGTTTCCAGATCGTGCACCCAGTGATTTACATCTCTACACCACCTTTGTAGGGGGGACAAGAAACACAGATCTCGCAAAAGCTTCAACTGACGAGCTTAAGAGCATTGTGACTTCTGACCTGAGAAACTTGTTGGGAGCAGAGGGAGAGCCCACATTTGTCAAGTATGTTATGTCATCGATTTCTTTTTGGTGTAAACTCTACTTAGTGTTCTTACATGTTACATTTAATGGCAGCCATTTCTATTGGAGCAAAGGCTTTCCTTTGTATGGGCGTAACTATGCATCAGTTCTTCAAGCTATTGACAAAATGGAAAAGGATCTTCCTGGATTTTTCTATGCAGGTAACCACAAAGGTGGGCTCTCAGTTGGCAAAGCGATAGCCTCAGGTTGTAAAGCAGCTGATCTTGTTATCACTTACCTCAACTCTTCTTCAGAGAACAACATAGTACCTGATAAATGA 1605 0.4168 MASSAERDNPRSAKRVAVVGAGVSGLAAAYTLKSHGLDVTVFEAEARAGGRLKSVSHDGLVWDEGANTMTASELEVKELIEALGLQGKQQFPNSQHKRYIAKNGKPVLVPTNPAALLKTQLLSARSKIQLIFEPFMWKRSDPSRVCDENYTESVGSFFERHFGQEVVDYLIDPFVGGTSAADPESLSVKHHFYLYILSNVYPIRFRFGSIIAGAFKSKLFSKPDKTSQRKVKVASRKDKHKRGSFSFLGGMQTLTDALCKELGQDDLKLNSKVLTLAYNHDGSSSSQNWSISCASNQNIEAVDAVIMTAPLCNVKEMKITKRATPFPLNFLPEVTYVPLSVIITTFRKENVKRPLEGFGVLVPSKEQQNGLKTLGTLFSSMMFPDRAPSDLHLYTTFVGGTRNTDLAKASTDELKSIVTSDLRNLLGAEGEPTFVKYVMSSISFWCKLYLVFLHVTFNGSHFYWSKGFPLYGRNYASVLQAIDKMEKDLPGFFYAGNHKGGLSVGKAIASGCKAADLVITYLNSSSENNIVPDK 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02398 534 Pfam Flavin containing amine oxidoreductase 23 519 IPR002937 GO:0016491
Adu06g02398 534 SUPERFAMILY FAD-linked reductases, C-terminal domain 336 437 - -
Adu06g02398 534 PANTHER PROTOPORPHYRINOGEN OXIDASE 12 522 - -
Adu06g02398 534 Gene3D protoporphyrinogen ix oxidase, domain 3 109 220 - -
Adu06g02398 534 Gene3D - 15 515 IPR036188 -
Adu06g02398 534 SUPERFAMILY FAD/NAD(P)-binding domain 11 522 IPR036188 -
Adu06g02398 534 TIGRFAM proto_IX_ox: protoporphyrinogen oxidase 14 523 IPR004572 GO:0004729|GO:0006779
Adu06g02398 534 PRINTS Adrenodoxin reductase family signature 38 51 - -
Adu06g02398 534 PRINTS Adrenodoxin reductase family signature 15 37 - -
Adu06g02398 534 PANTHER PROTOPORPHYRINOGEN OXIDASE 12 522 - -
Adu06g02398 534 Gene3D Protoporphyrinogen oxidase, mitochondrial; domain 2 51 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02398 Adu-Chr6 97639501 97647112 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02398 15 86 Acyl Lipid Metabolism Gene Families AT3G23530 38.158 5.46e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02398 K00231 - gmx:547941 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02398 06 97639501 97647112 Adu06g02398 06 97639501 97647112 ECH