Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02394 ATGGTTATGGATAAGCTAAGCCAATATGAACGTGTGTTCAACCACTTCGATGAGAATGGAGACGGCAAGATATCGGCATCGGAACTGAAGCAATGCGTGGAGGAAGTGGGTGGGGAGTTGTCGGCCAAGGAGGCGGAGGTGGCCGTAACATTACTGGATTTGGACGGGGATGGGCTTCTGGGACTCGATGATTTTGTGAGGTTTGTGGAAGGAGGAGAAGAGGAAGAGAAAGTGAATGATTTAAGAGAGGCTTTTAAGATGTATGAGATGGACGGGAGTGGTTGCATCACACCAAAGAGCCTTAAGAGGATGCTTAGCAGGTTAGCGCACTCGTCTCTCCTCTTTCATAGCTCGTCTTTGGCTTTCTTGGCAACGGCGACAAACTCCTCCTCTGGTGAAGATGAAGATGTGATTTCTCAAAGTGTAAACTCGAGTTCTCTCATCTCTCTCGCGGTGTCTCATCAGTTCTTGTACTCAAGCTTTCTCCCTCTCTCGGCTCTGGTCTCTCTCACTATCTCCGGTGTCGCACTCAAGCTCATCATCGCTCTTTTGGCTCCGATATCTCTCAATGTCTCCAATCTAGCACTCAGTCGTGATCGTGCACCATTCCTGCCCTCGTCGTTGTTGGCGGAAGATGCAGCAGGTCCTGGGATTTGTCTTCATCGCTCCCTGTCTCGTCACCGTCGAACAGTCAGTTCCACGCCTTCGTTGCGCTCGCAGTCATCTCGGCCCCCTTTCATCACAATTCCTCTTGATATGCTGCAGTTCCTCCATAACTTGTTGGCGGTGATGGCGGTGTACGGCCTTCGGCTTGCTTGGTGCTGCTGCTTCTGCTCGGTATGTGGCACAAGAGGGAGAAGAAGCTCCGCGGCATCCAGGGTGTCCGGTGAGGGAGACAGCGACATCGGCGAGCATGGCTGGTGA 924 0.5216 MVMDKLSQYERVFNHFDENGDGKISASELKQCVEEVGGELSAKEAEVAVTLLDLDGDGLLGLDDFVRFVEGGEEEEKVNDLREAFKMYEMDGSGCITPKSLKRMLSRLAHSSLLFHSSSLAFLATATNSSSGEDEDVISQSVNSSSLISLAVSHQFLYSSFLPLSALVSLTISGVALKLIIALLAPISLNVSNLALSRDRAPFLPSSLLAEDAAGPGICLHRSLSRHRRTVSSTPSLRSQSSRPPFITIPLDMLQFLHNLLAVMAVYGLRLAWCCCFCSVCGTRGRRSSAASRVSGEGDSDIGEHGW 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02394 307 ProSiteProfiles EF-hand calcium-binding domain profile. 40 75 IPR002048 GO:0005509
Adu06g02394 307 ProSitePatterns EF-hand calcium-binding domain. 17 29 IPR018247 -
Adu06g02394 307 ProSiteProfiles EF-hand calcium-binding domain profile. 4 39 IPR002048 GO:0005509
Adu06g02394 307 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 4 110 - -
Adu06g02394 307 PANTHER EF HAND CALCIUM-BINDING FAMILY PROTEIN 4 110 - -
Adu06g02394 307 ProSiteProfiles EF-hand calcium-binding domain profile. 76 111 IPR002048 GO:0005509
Adu06g02394 307 SUPERFAMILY EF-hand 6 108 IPR011992 -
Adu06g02394 307 CDD EFh 8 106 IPR002048 GO:0005509
Adu06g02394 307 SMART efh_1 44 72 IPR002048 GO:0005509
Adu06g02394 307 SMART efh_1 80 108 IPR002048 GO:0005509
Adu06g02394 307 SMART efh_1 8 36 IPR002048 GO:0005509
Adu06g02394 307 Gene3D - 1 71 - -
Adu06g02394 307 ProSitePatterns EF-hand calcium-binding domain. 53 65 IPR018247 -
Adu06g02394 307 Gene3D - 72 112 - -
Adu06g02394 307 Pfam EF-hand domain pair 8 69 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02394 Adu-Chr6 97556595 97562585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02394 10 111 EF-hand Containing Proteins AT1G76640 48.571 1.61e-25 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02394 K13448 - fve:105352384 148.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02394 06 97556595 97562585 Adu06g02394 06 97556595 97562585 ECH