Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02247 ATGAACGAACTCGATCCACTAAACTCTAAACCAAACCAAGTAGTTTTGCTCAGAGTTGCAGCCACCTTCAAACCTCAGAACGCCACCACTATCGCCGCCGGCGGTGACAGCCAGAAGTTGCCGTCGTCGCCTCTCGAAGGTCTGCTCGGCTCTCTTCTCTTGGATACGCTTCTCCTCGACGTCGCTAGAAGCCTCTGTCTTCGAGCCCTCTCTCTCTTCCTCTCTCTGTGTCCGAGCTCACTTCCTTTCCTTCCTCGCCGTCGCTTCCCTTCCTCTCTCGCCGCTGATGGCGAGATATTGATAATACAAAGTAACGCACAGAGGAATCAATGCAGTTATAAAGCATGTACCAAGAAAATCTCATGCCGAAGCTTTGCCAAATTGACACATCCAAAACTGCACCTTCATGTCCGAACCCCCATAGACGCTTCCATCATCAAGACAGGCTTCATGCCCCAAACATGCCGTTTCAATTTCCTGATCAGGGCCTGTGTTCAACGGGGCGAATTGCGCCGTGCTCGGAAGCTGTTCGACGGAATGCCTCACAGAAACACCTTCTCTGCTAACATGATGATCATGGGTTACATACAATCTGGCGATCTTGCCACTGCAACTAACTTGTTTGATGGCATGGATGATCGCAATGCTGTTTCCTGGACAATGCTGATTGGCGGCTATGCTCAAAACAATAGGTTTCGTGAAGCCTTTGGTCTTTTTGTTGAGATGTGTAGGCATGGAGTTGAACCAGATTATGTTACATTTTCCACTCTCTTATCTGGGTTCACTGAGTTCAATTCTGTCAATGAAGTAACCCAGGTTCATGCCTATGTCGTTAAGTTGGGGCATAATTCGGCCATGGTAGTTTCCAACTCATTGCTTGATTCTTACTGTAAAACCCGCAGCCTTGGGTTAGCTTGTCAGCTGTTTGAGCACATGCCTATGAAGGATTCTGTCACTTACAATGCATTAATGGCAGGGTATTCGAAAGAGAGGTTGAATCAGGAGGCCTTAAACCTGTTCTTCAGGATGCAGGATTTGGAGTTTAAGCCTACAGAATTTACTTTTGCTACAGTTTTGTGTTGCGGGATACAGTTGGATGATATAGAATTTGGGCAACAGGTTCACAGTCTTCTGCTGAAGACTAATTTTGTGTGGAATGTGTTCGTGGCAAATGCTTTGCTTGATTTCTACTCGAAGCATGACCGGGTTGCTGAAGCACAGAAACTTTTTAATGAGATGCCAGAGTTGGATGGCATCTCTTACAATGTACTTATCACATGTTATGTGTGGAACGGAAGATTCAAAGAATCTATTGAACTATTCAGGGAGTTACACCTCACTAGATTTAACAGAAGGCAATTCCCATATGCTACGTTGCTGAGCATGGCTGCAAATGCATCGAACCTGGAAATGGGTAGGCAAATTCATTCCCAGGCTATTGTAACAGCAGCCATTTCAGACGATATGATTGGGAATTCTTTGGTTGACATGTATGCTAAATGTGACAGATTTGGGGAAGCAAATAGGATTTTTGCAAATTTGGCTCTTCAAAGTTCAGTTCCATGGACAGCTCTGATCTCGGGTAATGTTCAGAAGGGACACCCTGAAGAAGGTATAAAGCTATTCATTGAGATGCAAAGAGCTGAAAAGACTGCAGATGCAGCTACCTATGCCAGCATCCTAAAAGCCTGTGCAAATTTAGCCTCACAGGCTCTGGGAAAGCAGTTACACTCGCACATAATTAGATCAGGATGCCTTTCAAATGTATTTTCTGGGAGTGCACTGCTTGACATGTATGCGAAATGTGGATCCATCGAAAATGCACTTCAAATGTTTCAAGAGATGCCAGTTAGGAATTCAGTCTCCTGGAATGCACTGATTTCAGCTTATGCACAAAATGGAGATGGTGAAAATACTCTTAGGTCATTTGAACAAATGGTTCATTCAGGTCTGAAACCAAATGCTGTTAGTTTCCTTAGTGTGCTTTGTGCATGCAGCCATTGTGGTCTAGTTGAAGAAGGATTGCAATACTTCAACTCCATGACTCAAATATATGAAGTTACTCCTAAACGAGAGCATTATACTTCAATGGTCGATATGCTTTGTCGGAGTGGGAGATTCGAGGAGGCAGTGAAAATGATGGCTCAGATGCCTTTTGAACCTGATGAAATAATGTGGTCATCGGTTCTAAACTCCTGCAGAATCCATAAAAATCAAGAGTTGGCAAAGAAAGCAGCAGACCAATTATTTAGCATGAAGGAGCTCAGAGATGCTGCTCCATATGTTAGCATGGCCAATATATATGCAGAAGTTGGTGAATGGGAAAATGTAGGGAAGGTGAAGACGGCCATGAGAAGCCGAGGAATTAGAAAAGTGCCGGCTTACAGTTGGGTCGAGATCAAACACAAAACTCATATTTTTTCAGCAAATAACAAGTCTCACCCACAAATGAAAGAGATCACAAGGAAGCTTGATGATCTGGAGGAGCAAATGGAGAAAGAAGGGTACAAGCCTGACTTAAGCTGTGCCCTTCACAATGAGGATAACGAACTGAAGGCAGAATCCCTTAAATATCACAGTGAACGCATTGCCATTGCATATGCACTGATCAGCACCTCAGAAGGGTCACCGATTGTAGTAATGAAGAATATAAGAGCTTGTACAAATTGCCATGCTGCAATCAAGGCAATATCCAAGATAGTTGGTAGGGAAATCACAGCTCTTGCTGATATATTACCAAAAGAAACACTTCTGTGGAAGCTGAAGCTGCTTAGATCAGCTTCTGCATATGCCAACTCATGCCTTCATGCTGTAAAAGCTCAGGCTTTGATACTATCCAGTGAAAAAGACGAATTACTACCTAGCAAAGAGGAAGGCGAAAGGCTATGTAAGTTATTATCTAACTCTGAGCTATGTAAATTTGCAGACAGTGGACATTTCCTATTCCTGGAAGGCAACATTGACCGGGTAACAGTCATCAAGGGAACTTCTTTCTAA 2997 0.4368 MNELDPLNSKPNQVVLLRVAATFKPQNATTIAAGGDSQKLPSSPLEGLLGSLLLDTLLLDVARSLCLRALSLFLSLCPSSLPFLPRRRFPSSLAADGEILIIQSNAQRNQCSYKACTKKISCRSFAKLTHPKLHLHVRTPIDASIIKTGFMPQTCRFNFLIRACVQRGELRRARKLFDGMPHRNTFSANMMIMGYIQSGDLATATNLFDGMDDRNAVSWTMLIGGYAQNNRFREAFGLFVEMCRHGVEPDYVTFSTLLSGFTEFNSVNEVTQVHAYVVKLGHNSAMVVSNSLLDSYCKTRSLGLACQLFEHMPMKDSVTYNALMAGYSKERLNQEALNLFFRMQDLEFKPTEFTFATVLCCGIQLDDIEFGQQVHSLLLKTNFVWNVFVANALLDFYSKHDRVAEAQKLFNEMPELDGISYNVLITCYVWNGRFKESIELFRELHLTRFNRRQFPYATLLSMAANASNLEMGRQIHSQAIVTAAISDDMIGNSLVDMYAKCDRFGEANRIFANLALQSSVPWTALISGNVQKGHPEEGIKLFIEMQRAEKTADAATYASILKACANLASQALGKQLHSHIIRSGCLSNVFSGSALLDMYAKCGSIENALQMFQEMPVRNSVSWNALISAYAQNGDGENTLRSFEQMVHSGLKPNAVSFLSVLCACSHCGLVEEGLQYFNSMTQIYEVTPKREHYTSMVDMLCRSGRFEEAVKMMAQMPFEPDEIMWSSVLNSCRIHKNQELAKKAADQLFSMKELRDAAPYVSMANIYAEVGEWENVGKVKTAMRSRGIRKVPAYSWVEIKHKTHIFSANNKSHPQMKEITRKLDDLEEQMEKEGYKPDLSCALHNEDNELKAESLKYHSERIAIAYALISTSEGSPIVVMKNIRACTNCHAAIKAISKIVGREITALADILPKETLLWKLKLLRSASAYANSCLHAVKAQALILSSEKDELLPSKEEGERLCKLLSNSELCKFADSGHFLFLEGNIDRVTVIKGTSF 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02247 998 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 316 350 IPR002885 -
Adu06g02247 998 Coils Coil 817 837 - -
Adu06g02247 998 Pfam E motif 736 799 IPR046848 -
Adu06g02247 998 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 588 618 IPR002885 -
Adu06g02247 998 Gene3D alpha/beta hydrolase 895 990 IPR029058 -
Adu06g02247 998 PANTHER OS01G0913400 PROTEIN-RELATED 137 451 - -
Adu06g02247 998 Pfam DYW family of nucleic acid deaminases 835 906 IPR032867 GO:0008270
Adu06g02247 998 Gene3D Tetratricopeptide repeat domain 686 864 IPR011990 GO:0005515
Adu06g02247 998 Gene3D Tetratricopeptide repeat domain 571 685 IPR011990 GO:0005515
Adu06g02247 998 Gene3D Tetratricopeptide repeat domain 358 485 IPR011990 GO:0005515
Adu06g02247 998 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 417 451 IPR002885 -
Adu06g02247 998 PANTHER - 455 545 - -
Adu06g02247 998 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 215 249 IPR002885 -
Adu06g02247 998 PANTHER OS01G0913400 PROTEIN-RELATED 455 545 - -
Adu06g02247 998 PANTHER OS01G0913400 PROTEIN-RELATED 551 870 - -
Adu06g02247 998 Pfam alpha/beta hydrolase fold 906 985 IPR000073 -
Adu06g02247 998 PANTHER - 137 451 - -
Adu06g02247 998 PANTHER - 551 870 - -
Adu06g02247 998 Pfam PPR repeat 391 415 IPR002885 -
Adu06g02247 998 Pfam PPR repeat 419 444 IPR002885 -
Adu06g02247 998 Pfam PPR repeat 157 183 IPR002885 -
Adu06g02247 998 Pfam PPR repeat 593 618 IPR002885 -
Adu06g02247 998 Pfam PPR repeat 187 214 IPR002885 -
Adu06g02247 998 Gene3D Tetratricopeptide repeat domain 486 570 IPR011990 GO:0005515
Adu06g02247 998 Gene3D Tetratricopeptide repeat domain 144 279 IPR011990 GO:0005515
Adu06g02247 998 Pfam PPR repeat family 619 665 IPR002885 -
Adu06g02247 998 Pfam PPR repeat family 315 360 IPR002885 -
Adu06g02247 998 Pfam PPR repeat family 519 566 IPR002885 -
Adu06g02247 998 Pfam PPR repeat family 215 261 IPR002885 -
Adu06g02247 998 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 386 416 IPR002885 -
Adu06g02247 998 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 690 720 IPR002885 -
Adu06g02247 998 TIGRFAM PPR: pentatricopeptide repeat domain 694 718 IPR002885 -
Adu06g02247 998 TIGRFAM PPR: pentatricopeptide repeat domain 419 445 IPR002885 -
Adu06g02247 998 TIGRFAM PPR: pentatricopeptide repeat domain 318 352 IPR002885 -
Adu06g02247 998 TIGRFAM PPR: pentatricopeptide repeat domain 217 250 IPR002885 -
Adu06g02247 998 TIGRFAM PPR: pentatricopeptide repeat domain 621 655 IPR002885 -
Adu06g02247 998 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 518 552 IPR002885 -
Adu06g02247 998 Pfam PPR repeat 693 717 IPR002885 -
Adu06g02247 998 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 619 653 IPR002885 -
Adu06g02247 998 SUPERFAMILY alpha/beta-Hydrolases 923 989 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02247 Adu-Chr6 93680578 93686912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02247 147 906 Glycoside Hydrolase AT3G49170 32.908 1.70e-140 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02247 - - gmx:100793014 1238.79