Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02239 ATGGCGAACAAACTACTGATTTTGTTTCTAGGAACAATACTGTTCCTGTGTGTGGAATCAAAGTACATAGCGTATAACACCTCGCAGGGCGTGGTGCCTGGGAAGCTCAACGTTCATCTCGTTGCTCATACACACGACGATGTTGGTTGGTTGAAGACCGTTGATCAGTACTATGTTGGTTCTAACAATTCAATTCAGGGGGCTTGTGTGCAAAATGTGTTGGATTCTGTTGTTCAAGCTCTTTTGGCTGATAAGAATCGAAAGTTTATCTACGTTGAGCAAGCCTTTTTCCAGAGATGGTGGAGAGATCAGAGTGAGGCTGCTCAGGATAGTGTAAAGAAACTCGTTAGTTCGGGTCAACTAGAGTTCATAAATGGAGGCATGTGTATGCATGATGAGGCATCAACTCATTACATAGACATGATTGATCAGACTACACTTGGACATCGGTTTATTAAAGAGGAGTTTGGTGTGACTCCTAGAATTGGTTGGCAAATTGATCCCTTTGGACATTCTGCTGTGCAGGCTTACTTATTGGGAGCTGAAGTTGGCTTTGACTCACTTTTCTTTGGTCGGATAGATTACCAAGATAGGGCTAAGCGCAAAAGGGAGAAGAGTCTTGAGGTCATATGGCAGGGTAGTAAGAGCTTTGGCTCATCAGCCCGGATCTTCGCAGGTGCTTTCCCTGAGAATTATGAGCCACCACCTGGTGGATTTTACTTTGAAGTTAATGATGTTTCACCAGTAATTCAAGATAATCTGGATTTGTTTGACTACAATGTTGAAGATCGAGTGAATGACTTTGTTACTGCTGCATTGTCACAGGCAAACATAACTCGAACAAATCATATAATGTGGACGATGGGAACTGATTTTAAGTATCAATATGCACATACATGGTTCCGACAGCTTGACAAGTTTATTCATTATGTCAACAAGGATGGACGTGTCAATGCTTTGTACTCTACACCATCCATATATACGGATGCAAAATATGCTACAAATGAGTCATGGCCAATCAAGACTGATGATTACTTCCCTTATGCAGATAATGCAAATGCTTACTGGACTGGATACCTTACCAGTAGGCCAGCTATCAAGCGCTATGTCAGATTAATGAGTGGCTATTATTTGGCTGCAAGACAACTAGAATTTTTTAGTGGGAGAATGAATTCAGGGCCAAATACAGACTCATTAGCTGATGCTTTGGCAATTGCTCAACACCATGATGCTGTCACTGGCACAGAACAGCAGCATGTGGCAAATGATTATTCGAAACGATTGGCAATAGGCTACAAGGAGGCAGAGCAATTGGTTTCATCAACACTGGCATGCTTGGCTGAGTCAACAGTGCTCGCTGGATGTCAGAACCCAGTTACAATGTTTCAACAATGTCCACTTTTGAATATAAGTTATTGTCCTGCATCAGAAGTTGATCTCAGTCATGGAAAGAATTTGGTTATTATTGTTTACAACTCTCTTGCTTGGAGAAGGAACGAAGTGATTCGAATTCCTGTTATTGATGACAATGTTGCGGTTCATGACTCTAATGGCACAGAAATAGAATCTCAACTTCTTCCTCAAGCTGAGGCCTTCGAAGGCTTAAGAAACTTCTATGTCAAGGCATATTTGGGACACACTCCACTCAACACACCCAAATATTGGCTTGCGTTCACAGTTTCAGTACCTCCACTTGGTTTTAGCACATACACTGTCTCAACTGCCAAAAGGACAGGTTCAACCAAATCATCAGTAAATACATATCAAAGTAATGAAAAGGCGAGGTTTGAAGTTGGTCAAGGGAACTTGAAACTTAGATTCTTTACAGATGAAGAAACACACAGCAATTATGTTAATATAAGAAGCATGATGGACAAACAAGTTGAACAGAAGTACCTTTACTACTCAGGATATAATGGAAGTCATCAAAAGGATCCACAGAATTCTGGGGCATATATTTTTCGTCCAAATGGCACATATTTCATCAACCATGAAAGACAGGTTCCTTTTACTGTTTTGCATGGACCATTGCTTGATGAAGTGCATCAACAAATCAACCCATGGATATATCAGATTACCAGGCTACACAAAGAAAAGGAGCATGTTGAAGTAGAGTTTATTGTTGGCCCTATACCTATTGAAGATGGAACTGGTAAAGAAGTTGCCACTAAGATTTCAACTGCTTTAAGCAGCAAGAAAACATTTTACACAGATTCTAACGGTCGCGATTTTATCAAAAGGATACGTGACTTCAGAACAGACTGGGATCTGGAAGTGAACCAGCCCATTGCAGGAAATTATTACCCTATTAATCTAGGGATATACATAAAAGATAATAAGACAGAATTCTCAGTTTTGGTGGATAGATCTGTTGGAGGATCTAGCCTAGAAGATGGACAAATAGAACTGATGGTCCACAGGCGATTGCTACTTGATGATTCAAAAGGTGTTGCAGAGGCTCTAAATGAAACAGACTGTGTCGCTGATGATTGCAGGGGCCTAACTGTCCAAGGTAAATTTTACTACAGGATAGATCCCTTGGGTGAGGGTGCAAAGTGGCGCCGAACTTTTGGTCAGGAGATATATTCTCCTCTTCTATTAGCTTTCTCTGAAAAGGATGATAAAGATGATTGGATGAATTCCCATGTGCCAACATTTTCAGGAATGGATTCGTCATATACATTGCCTGATAACATTGCAATGATAACATTACAGGAACTTGATGATGGGGCAGTTCTGCTTCGGTTAGCACATCTATATGAGATTGGAGAAGATAAGGATCTCTCTGTAAAGACAAGTGTAGAGCTGAAAAGACTCTTCCCTGAAAAGAAGATCAAAGGGGTGAAAGAGATGAGCTTGTCAGCCAATCAAGAAAGGACAGAAATGGAGAAGAAAAGATTTGCATGGAAAGTAAAAGGGTCTTTAGGAGATGAACATGTTTTATCAAGGGGAGGGCCAGTTGATCAAAAAGAGCTAGCTGTGGAGCTTGCTCCCATGGAGATCCGCACTTTTATCATTTACTTTGATGACAATGACATGCCTAACCTTCTCTCAGATGCATAG 3063 0.4084 MANKLLILFLGTILFLCVESKYIAYNTSQGVVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSVVQALLADKNRKFIYVEQAFFQRWWRDQSEAAQDSVKKLVSSGQLEFINGGMCMHDEASTHYIDMIDQTTLGHRFIKEEFGVTPRIGWQIDPFGHSAVQAYLLGAEVGFDSLFFGRIDYQDRAKRKREKSLEVIWQGSKSFGSSARIFAGAFPENYEPPPGGFYFEVNDVSPVIQDNLDLFDYNVEDRVNDFVTAALSQANITRTNHIMWTMGTDFKYQYAHTWFRQLDKFIHYVNKDGRVNALYSTPSIYTDAKYATNESWPIKTDDYFPYADNANAYWTGYLTSRPAIKRYVRLMSGYYLAARQLEFFSGRMNSGPNTDSLADALAIAQHHDAVTGTEQQHVANDYSKRLAIGYKEAEQLVSSTLACLAESTVLAGCQNPVTMFQQCPLLNISYCPASEVDLSHGKNLVIIVYNSLAWRRNEVIRIPVIDDNVAVHDSNGTEIESQLLPQAEAFEGLRNFYVKAYLGHTPLNTPKYWLAFTVSVPPLGFSTYTVSTAKRTGSTKSSVNTYQSNEKARFEVGQGNLKLRFFTDEETHSNYVNIRSMMDKQVEQKYLYYSGYNGSHQKDPQNSGAYIFRPNGTYFINHERQVPFTVLHGPLLDEVHQQINPWIYQITRLHKEKEHVEVEFIVGPIPIEDGTGKEVATKISTALSSKKTFYTDSNGRDFIKRIRDFRTDWDLEVNQPIAGNYYPINLGIYIKDNKTEFSVLVDRSVGGSSLEDGQIELMVHRRLLLDDSKGVAEALNETDCVADDCRGLTVQGKFYYRIDPLGEGAKWRRTFGQEIYSPLLLAFSEKDDKDDWMNSHVPTFSGMDSSYTLPDNIAMITLQELDDGAVLLRLAHLYEIGEDKDLSVKTSVELKRLFPEKKIKGVKEMSLSANQERTEMEKKRFAWKVKGSLGDEHVLSRGGPVDQKELAVELAPMEIRTFIIYFDDNDMPNLLSDA 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02239 1020 CDD GH38N_AMII_LAM_like 36 313 - -
Adu06g02239 1020 Pfam Alpha mannosidase middle domain 354 446 IPR015341 GO:0004559|GO:0006013
Adu06g02239 1020 Gene3D - 474 598 IPR013780 -
Adu06g02239 1020 Gene3D - 884 1012 - -
Adu06g02239 1020 SMART Alpha_mann_mid_2 354 428 IPR015341 GO:0004559|GO:0006013
Adu06g02239 1020 Gene3D - 599 863 - -
Adu06g02239 1020 Gene3D Glycoside hydrolase family 38, central domain 397 451 IPR037094 GO:0004559|GO:0006013
Adu06g02239 1020 Pfam Glycosyl hydrolases family 38 N-terminal domain 37 349 IPR000602 GO:0004559|GO:0006013
Adu06g02239 1020 Gene3D Glycoside hydrolase family 38, central domain 318 396 IPR037094 GO:0004559|GO:0006013
Adu06g02239 1020 PANTHER ALPHA-MANNOSIDASE 13 1010 - -
Adu06g02239 1020 PANTHER ALPHA-MANNOSIDASE 13 1010 - -
Adu06g02239 1020 SUPERFAMILY Glycoside hydrolase/deacetylase 25 350 IPR011330 GO:0005975
Adu06g02239 1020 SUPERFAMILY Families 57/38 glycoside transferase middle domain 353 446 IPR028995 -
Adu06g02239 1020 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 898 1005 IPR041147 -
Adu06g02239 1020 Pfam Glycosyl hydrolases family 38 C-terminal domain 621 814 IPR011682 GO:0004559|GO:0006013
Adu06g02239 1020 Gene3D Glycoside hydrolase 38, N terminal domain 36 317 IPR027291 -
Adu06g02239 1020 SUPERFAMILY Galactose mutarotase-like 457 1008 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02239 Adu-Chr6 93470984 93491116 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g02239 6 921 Glycoside Hydrolase AT5G13980 71.553 0.0 1396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02239 K01191 - gmx:100776282 1719.13