LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu06g02237	ATGGGCGCTGCTACGGTGCTACTCGTCGTTATAGTGGCGGCGATTTGGGTGGCGCAATCACACTCAGAGTACATAGAGTACAACACCACGCAGAGGATCGTCAACGGTCAAATAAACGTTCACTTGGTGCCTCACTCCCACGACGATGTTGGCTGGCTCAAGACCGTTGATCAGTACTACGTCGGAGCCAACAACTCCATTCGTGGTGCATGTGTGCAGAACGTGCTGGATTCTGTGATCTCTGCGCTTTTGGAAGACAAGAATCGCAAATTTATCTATGTTGAGATGGCATTTTTCCAACGATGGTGGAGACAGCAAAGTAAAGCTAAGAAAATTAAAGTGAAGGAGCTTGTTGACTCTGGTCAGCTTGAATTCATAAATGGGGGCATGTGCATGCATGATGAGGCCACCCCGCATTACATTGACCTGATTGATCAGACAACTCTCGGGCATCAATTCATTAAAGATGAGTTCAGTAAGACTCCAAGAGTTGGCTGGCAGATCGATCCTTTTGGCCATTCTGCGGTTCAGGCGTACTTGCTTGGCGCTGAGCTGGGATTCAATTCGCTCTTTTTTGCCAGAATTGATTACCAGGATAGAGCCAAGCGATTGAAGGAGAAGATGCTTGAGGTTATTTGGCAGGGTTCTAGGTCTCTTGGTTCTTCTTCACAAATATTTACTGGGATATTTCCCAGGCATTATGATCCTCCTGATGGCTTCACGTTTGAGATCAATGATGTTTCCCCTCCTATTCAGGATGACATTGAACTGTTTGACTATAATGTTCAAGAAAGGGTCAATGACTTTGTAGCTGCAGCCATATATCAGGCTAATGTGACCAGAACCAATCACATTATGTGGGCAATGGGGACAGACTTCCGGTATCAATATGCTGATTCATGGTTCAGGCAGATGGATAAGTTTATTCACTATGTGAATCAGGATGGGCGTGTCAATGCATTATATTCAACACCATCTATCTACACTGATTCAAAATATGCAGCGAATGAGCAATGGCCTCTTAAAGTTGATGATTTCTTCCCATATGCAGATAAACCGAATGCATATTGGACTGGCTATTTTACAAGTAGGCCAGCTTTAAAGGGTTATGTGAGAGTGATGAGTGGTTACTATCAGGCAGCAAGGCAATTAGAATTTTTCAAAGGGAGGAATGCATCTCGACCAAATACTAATTTATTAGCAGAAGCTTTAGCAATTGCTCAGCATCATGATGCAGTGAGTGGCACAGAGAGACAACATGTTGCTGCTGATTATGCACTGCGACTGTCATTGGGCTATAAGGAGGCAGAAGTGGTGGTTGCATCTGCCCTTGCTTTCTTGGTAAACCAAAAGTTAAGTTCGCAACAGGTGAAGCCAGTGACGGACTTACAACAGGCAATGCACTCTGGACACAGAATAAGTTTCTTATGTTTTCAATCGATGTGTCCTCTACTCAATATAAGTTACTGTCCTTCATCAGAAGCTACGTTGAGCAATGGAAAAAGCTTGGTGATTGTTGTTTATAACCCACTTGCTTGGAAGAGGGAGGAAGTAATTCGAATTCCTGTTTCCACCACAGACATTTCTGTCAAAGATTCTGCTGGGAATGAAGTTGAGTCTCAAATTCTGCCACTATCCAATGCCACTTCAATCCTAAGAAAATACTATGTCAAAGCGTATCTAGGAAAATCTCCTGGTTCAGAACCAAAGTACTGGCTTGCATTTCCAGTGTCTGTACCTCCCCTTGGTTTCAGCACATACATAGTCTCCAAGCCTAGACAGACAGGTAATCGTTCAACCATATCCAAGGTGCACAAATCAGAAAGAAGTACAAATACCAGCATAGAAGTTGGACAAGGGAATTTGAAGCTGCTTTATTCTGCAGATGAAAGAAAGCTTACTCATTATGTTAACAGTAGAAATCTTGTTAAAGCATCTGTTGAACAAACATACAGTTATTATTCTGGAAATGATGGAACAGATAAAGATCCTCAGGCTTCTGGGGCATATGTATTCCGCCCAAATGGATCATTTCCAATTAGATCTGATCGCCAGGAATCTTTTGCTGTTCTAAGTGGTCCAGTGCTGGATGAAGTTCATCAGCAGCTCAATCCATGGATATCTCAGATTACAAGGATATTCAAGGGAAAGGAACATGCTGAAGTTGAGTTCACAACCAACAAAACATTCTACACAGATTCCAATGGACGTGACTTCATTAAAAGGATTCGAGATTTCCGGACAGACTGGGATCTACAAGTGAACCAACCCATAGCTGGAAACTATTATCCGGTTAACTTAGGAATATATGTGCAAGATAGCAACACAGAACTCTCAGTGTTGGTGGACCGTTCAGTTGGGGTTTCAAGCTTGGTAGACGGTCAAGTAGAGCTCATGCTCCACAGGAGGCTTATCCATGACGATACAAGAGGCGTTGGTGAGGCACTCAATGAAACAGTTTGCATTGCTGGTAGCTGTGAAGGTTTAACCATTCAAGGAAAACTGTACCTTAAAATTGATCCTATAGGTGAAGGTGCTAAGTGGCGTCGAACAGTTGGCCAGGAATTATATTCACCACTGTTGTTGGCATTCACAGAACAGGATGGGGATAATTTGTCAAATTTTCAATCATCAACGTTTTCTGGCATAGATTCTTCATACAGTTTCCCAAACAATACTGCTCTTTTAACACTCCAGGAACTTTACAGTGGAAAAATACTTCTAAGATTGGCTCACCTTTACGAGATTGAGGAGGACAAAGATTATTCAGCAATGGCAAGCGTGGAATTGTTAAAGCTGTTTCCTAACAAGAAGATAAGGAAAGTGACCGAGATGAGTTTGTCTGCTAATCAAGAAAGAGCTGAAATGGAAAAGAAGAGGTTAGCATGGAAAGTAGAAGGCTCCACGAAAGAAACTAAGGTGGTGAGGGGAGGGCCTGTTGATCCTGAAAAGTTGGTGGTTGAACTTGCTCCAATGGAAATTAGGACATTTTTTATTGAATTTGCTTCCCTTCAAACGGTTCCTGAAGCAGAAAATCAAGCGGCAACAAATCACACAAACCCAGCCAAAAATCCTAGCACTTTAAGCCTACACCACCGCCGCAAGGAGTGGCATACTGCCGCCGTCCGTCGCACTCAAAGTTCGCCATCCGTCCGTCTATCTAGCTTCCCTCGTGCTCCAAGTCTTCAACCCCTGTTCACTGTAACCGATCGCGGCTGCTTCCTCGAGCTCGGCGTCCGTCGTCTTTGTCTGCTCAGCCGCGCTTCCGTCGCCGTTTGTTTGCCGTTCACGTTCGCGTCTTCGTTCAGCTGTCGTCTTCGTTCGCGTTCTTCGCCGTTCACCGTCTGCTTCAACTCTGCAACTTCTGATTTCTATTACAATAAGTAA	3387	0.4379	MGAATVLLVVIVAAIWVAQSHSEYIEYNTTQRIVNGQINVHLVPHSHDDVGWLKTVDQYYVGANNSIRGACVQNVLDSVISALLEDKNRKFIYVEMAFFQRWWRQQSKAKKIKVKELVDSGQLEFINGGMCMHDEATPHYIDLIDQTTLGHQFIKDEFSKTPRVGWQIDPFGHSAVQAYLLGAELGFNSLFFARIDYQDRAKRLKEKMLEVIWQGSRSLGSSSQIFTGIFPRHYDPPDGFTFEINDVSPPIQDDIELFDYNVQERVNDFVAAAIYQANVTRTNHIMWAMGTDFRYQYADSWFRQMDKFIHYVNQDGRVNALYSTPSIYTDSKYAANEQWPLKVDDFFPYADKPNAYWTGYFTSRPALKGYVRVMSGYYQAARQLEFFKGRNASRPNTNLLAEALAIAQHHDAVSGTERQHVAADYALRLSLGYKEAEVVVASALAFLVNQKLSSQQVKPVTDLQQAMHSGHRISFLCFQSMCPLLNISYCPSSEATLSNGKSLVIVVYNPLAWKREEVIRIPVSTTDISVKDSAGNEVESQILPLSNATSILRKYYVKAYLGKSPGSEPKYWLAFPVSVPPLGFSTYIVSKPRQTGNRSTISKVHKSERSTNTSIEVGQGNLKLLYSADERKLTHYVNSRNLVKASVEQTYSYYSGNDGTDKDPQASGAYVFRPNGSFPIRSDRQESFAVLSGPVLDEVHQQLNPWISQITRIFKGKEHAEVEFTTNKTFYTDSNGRDFIKRIRDFRTDWDLQVNQPIAGNYYPVNLGIYVQDSNTELSVLVDRSVGVSSLVDGQVELMLHRRLIHDDTRGVGEALNETVCIAGSCEGLTIQGKLYLKIDPIGEGAKWRRTVGQELYSPLLLAFTEQDGDNLSNFQSSTFSGIDSSYSFPNNTALLTLQELYSGKILLRLAHLYEIEEDKDYSAMASVELLKLFPNKKIRKVTEMSLSANQERAEMEKKRLAWKVEGSTKETKVVRGGPVDPEKLVVELAPMEIRTFFIEFASLQTVPEAENQAATNHTNPAKNPSTLSLHHRRKEWHTAAVRRTQSSPSVRLSSFPRAPSLQPLFTVTDRGCFLELGVRRLCLLSRASVAVCLPFTFASSFSCRLRSRSSPFTVCFNSATSDFYYNK	1128

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu06g02237	1128	SUPERFAMILY	Glycoside hydrolase/deacetylase	27	353	IPR011330	GO:0005975
	Adu06g02237	1128	Pfam	Glycosyl hydrolases family 38 C-terminal domain	620	810	IPR011682	GO:0004559\|GO:0006013
	Adu06g02237	1128	Pfam	Alpha mannosidase middle domain	355	447	IPR015341	GO:0004559\|GO:0006013
	Adu06g02237	1128	Pfam	Glycosyl hydrolases family 38 C-terminal beta sandwich domain	893	998	IPR041147	-
	Adu06g02237	1128	SMART	Alpha_mann_mid_2	355	429	IPR015341	GO:0004559\|GO:0006013
	Adu06g02237	1128	Gene3D	Glycoside hydrolase family 38, central domain	319	397	IPR037094	GO:0004559\|GO:0006013
	Adu06g02237	1128	Gene3D	Glycoside hydrolase family 38, central domain	398	453	IPR037094	GO:0004559\|GO:0006013
	Adu06g02237	1128	CDD	GH38N_AMII_LAM_like	38	314	-	-
	Adu06g02237	1128	Gene3D	Glycoside hydrolase 38, N terminal domain	38	318	IPR027291	-
	Adu06g02237	1128	SUPERFAMILY	Galactose mutarotase-like	474	1001	IPR011013	GO:0003824\|GO:0005975\|GO:0030246
	Adu06g02237	1128	PANTHER	ALPHA-MANNOSIDASE	10	1005	-	-
	Adu06g02237	1128	Gene3D	-	618	726	-	-
	Adu06g02237	1128	Gene3D	-	727	858	-	-
	Adu06g02237	1128	PANTHER	ALPHA-MANNOSIDASE	10	1005	-	-
	Adu06g02237	1128	Pfam	Glycosyl hydrolases family 38 N-terminal domain	39	350	IPR000602	GO:0004559\|GO:0006013
	Adu06g02237	1128	SUPERFAMILY	Families 57/38 glycoside transferase middle domain	354	449	IPR028995	-
	Adu06g02237	1128	Gene3D	-	491	617	IPR013780	-
	Adu06g02237	1128	Gene3D	-	877	1004	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu06g02237	Adu-Chr6	93427845	93442166	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Adu06g02237	1	941	Glycoside Hydrolase	AT3G26720	69.710	0.0	1394

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu06g02237	K01191		-	gmx:100795651	1686

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Adu06g02237	06	93427845	93442166	Adu06g02237	06	93427845	93442166	ECH