Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02229 ATGTTGAGGGTTGCAGCAAAGAGGTTCTCTTCTCTGTCTTCGTCTTCATGGAGAGCTAACCATGCTGCCTCTGCTTTCGTCTCTCGGAACCCCATCGCCCCTCACTATGACTCCCACGATCGCGGATCCGCTCCCCAACCCCAATTCTTTCTCCCATTCCGCGGTTTTGCTACTGGATTGCCAGTCCATACAAAAGAAAACAGCATTATTCCTGAAATTCCAGCAACTGTCGCTGCTGTCAAAAACCCTTCCTCTAAGATTGTATACGATGAACACAATCATGAACGATATCCTCCCGGTGACCCAAGCAAGAGGGCATTTGCCTACTTTGTCCTAACAGGTGGTAGATTTGTCTATGCCTCTCTTGTCCGTCTCCTTATCCTCAAGTTTGTGCTCAGTATGTCAGCCAGTAAGGATGTTCTTGCTCTGGCTTCACTTGAAGTTGATCTCTCCAGCATTGAGCCAGGCACCACTGTGACTGTTAAGTGGCGTGGAAAGCCTGTGTTCATTAGGCGCAGAACAGAAGATGATATTAAGCTGGCAAACAGTGTTGACGTTGGATCTCTTCGCGATCCCCAGCAGGATGCGGAGAGAGTCAAGAACCCCGAGTGGCTCATTGTGATTGGGGTTTGCACACATTTGGGTTGTATCCCCTTGCCAAATGCTGGTGACTTTGGTGGTTGGTTTTGCCCTTGCCATGGCTCACATTATGATATTTCTGGCAGAATTAGGAAGGGACCAGCGCCATACAATCTGGAGGTACCAACTTATACCTTCTTGGAAGAGAACAAGTTGCTAATTGGTTGA 807 0.4833 MLRVAAKRFSSLSSSSWRANHAASAFVSRNPIAPHYDSHDRGSAPQPQFFLPFRGFATGLPVHTKENSIIPEIPATVAAVKNPSSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQQDAERVKNPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLEENKLLIG 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02229 268 PRINTS Rieske 2Fe-2S subunit signature 206 217 IPR005805 GO:0016020|GO:0051537
Adu06g02229 268 PRINTS Rieske 2Fe-2S subunit signature 228 240 IPR005805 GO:0016020|GO:0051537
Adu06g02229 268 PRINTS Rieske 2Fe-2S subunit signature 240 252 IPR005805 GO:0016020|GO:0051537
Adu06g02229 268 Pfam Rieske [2Fe-2S] domain 151 254 IPR017941 GO:0051537
Adu06g02229 268 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 268 - -
Adu06g02229 268 TIGRFAM Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 118 268 IPR006317 GO:0008121
Adu06g02229 268 CDD Rieske_cytochrome_bc1 145 268 - -
Adu06g02229 268 Pfam Ubiquinol cytochrome reductase transmembrane region 90 139 IPR004192 GO:0008121
Adu06g02229 268 SUPERFAMILY ISP transmembrane anchor 85 141 - -
Adu06g02229 268 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 178 266 IPR017941 GO:0051537
Adu06g02229 268 SUPERFAMILY ISP domain 130 267 IPR036922 GO:0051537
Adu06g02229 268 Gene3D - 137 268 IPR036922 GO:0051537
Adu06g02229 268 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 268 IPR014349 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02229 Adu-Chr6 93165510 93169114 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02229 K00411 - gmx:100806917 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02229 06 93165510 93169114 Adu06g02229 06 93165510 93169114 ECH