Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02185 ATGGCTTCGGCTACACTTTCTGTAGCCAAACCAGCTCTTCAGGTTCAATCAGCATACTATTATTACTATTACTGCTACCTTCCTTTCTCTAGGAAGACTTCAGATGACTTCCACTCTATCATTTCATTCCAGACATCTGCAGTTGGAAGCAGTGGAGGATACAGGAAAGGTGTGACGGAAGCGAAGTTGAAGGTGGCCATAAACGGTTTTGGCAGAATTGGAAGGAACTTCTTGAGGTGCTGGCATGGCCGCAAAGACTCTCCTCTGGATGTCATTGCCATCAATGACACCGGAGGCGTCAAGCAGGCCTCTCACCTTCTCAAGTATGACTCCACCCTTGGCATATTCGACGCCGACGTTAAGCCTGTCGGTGACGATGCCATCTCCGTTGACGGAAAGGTCATCAAAGTTGTCTCCAACCGCAACCCTGCTAACCTTCCCTGGAAGGAATTAGGAGTTGACTTGGTGATTGAAGGAACTGGGGTGTTCGTGGACAGAGAAGGTGCAGGGAAGCACATTCAGGCGGGAGCGAAGAAGGTTCTGATCACAGCCCCAGGCAAAGGTGACATCCCAACCTATGTAGTTGGTGTCAATGCTGATGCTTACAGCCCAGACGAACCCATCATCAGCAACGCTTCTTGCACCACTAACTGCCTTGCTCCCTTCGTCAAGGTCCTTGACCAGAAATTCGGTATCATCAAGGGAACCATGACCACCACTCACTCCTACACCGGAGACCAAAGGCTTCTTGACGCCAGCCACCGCGACCTCAGGCGCGCGAGGGCGGCAGCGCTGAACATCGTGCCGACCTCAACCGGAGCGGCCAAGGCGGTGGCGCTTGTGTTGCCGACACTTAAGGGGAAGCTGAACGGAATTGCATTGCGTGTGCCAACGCCAAACGTGTCCGTCGTTGACCTCGTTGTTCAGGTGTCAAAGAAGACGTTCGCGGAGGAAGTCAACGCTGCGTTCAGAGAGAGCGCGGAGAAGGAGCTTAACGGCATCCTCTCAGTGTGTGATGAACCACTTGTCTCCGTTGATTTCAGGTGCACCGACGTTTCATCTACCGTTGACTCTTCGTTGACCATGGTCATGGGTGATGACATGGTGAAGGTTATTGCATGGTATGATAATGAGTGGGGTTACTCACAAAGGGTTGTGGATTTGGCTGACATTGTTGCAAACAGCTGGAAGTGA 1194 0.5193 MASATLSVAKPALQVQSAYYYYYYCYLPFSRKTSDDFHSIISFQTSAVGSSGGYRKGVTEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTGGVKQASHLLKYDSTLGIFDADVKPVGDDAISVDGKVIKVVSNRNPANLPWKELGVDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYSPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESAEKELNGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDMVKVIAWYDNEWGYSQRVVDLADIVANSWK 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02185 397 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 219 375 IPR020829 GO:0016620
Adu06g02185 397 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 64 165 IPR020828 GO:0051287
Adu06g02185 397 Gene3D - 64 389 - -
Adu06g02185 397 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2 1 397 IPR020831 GO:0016620
Adu06g02185 397 TIGRFAM GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 64 387 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Adu06g02185 397 SMART gp_dh_n_7 63 214 IPR020828 GO:0051287
Adu06g02185 397 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPA2, CHLOROPLASTIC 1 397 - -
Adu06g02185 397 PIRSF GAPDH 61 397 IPR020831 GO:0016620
Adu06g02185 397 Gene3D Dihydrodipicolinate Reductase; domain 2 213 377 - -
Adu06g02185 397 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 214 376 - -
Adu06g02185 397 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 212 219 IPR020830 GO:0016620
Adu06g02185 397 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 235 251 IPR020831 GO:0016620
Adu06g02185 397 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 208 226 IPR020831 GO:0016620
Adu06g02185 397 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 291 308 IPR020831 GO:0016620
Adu06g02185 397 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 172 185 IPR020831 GO:0016620
Adu06g02185 397 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 331 346 IPR020831 GO:0016620
Adu06g02185 397 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 62 230 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02185 Adu-Chr6 91670310 91672481 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02185 K05298 - tcc:18601182 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02185 06 91670310 91672481 Adu03g02096 03 41537456 41540900 ECH
Adu06g02185 06 91670310 91672481 Adu06g02185 06 91670310 91672481 ECH