Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02181 ATGGGCGCGAGCAGTGACCCGACCCAAGACGGTTCCGACGAGCAGCAAAAGCGTTCGGAGATCTACACCTACGAAGCTCCATGGCACATCTACGCCATGAACTGGAGCGTCCGCCGCGACAAGAAGTACCGCCTCGCCATCGCTTCTTTACTGGAACAGTACCCTAACAAGGTCGAGATCGTCCAGCTCGACGACTCCACCGGCGAGATCCGTTCCGATCCCGCCCTCTCCTTCGAGCACCCCTACCCTCCCACCAAAGCCATCTTCATCCCCGACAAGGACTGCTCCCGCCCCGACCTCCTCGCCACCTCCTCCGACTTCCTCCGCGTCTGGCGCCTCCCTGACTCCACCAACTCCGACGACGCCGCCACCACCACCGCCAACAACAACGGCAATGGCTCCCGCGGCGTTGGCGGCGGGGTTGAGCTTAAGAGTCTCCTGAACGGGAACAAGAACAGCGAGTTCTGCGGGCCGCTGACGTCATTCGATTGGAACGAGGCGGAGCCACGGCGGATCGGGACGTCGAGCATTGACACGACGTGCACGATTTGGGATATTGAGAAGGAGGCTGTGGATACGCAGCTTATTGCGCATGATAAGGAGGTTTATGATATTGCCTGGGGTGGTGTTGGGGTTTTCGCTTCCGTTTCTGCTGATGGTTCTGTTAGGGTTTTTGATCTTCGCGATAAGGAGCATTCCACCATTATTTACGAGAGCTCTGAGCCTGATACTCCCTTGGTTCGCCTCGGCTGGAACAAGCAGGATCCTAGGTACATGGCTACCATCATAATGGATAGTGCCAAGGTTGTGGTGCTTGATATTCGTTTTCCGACACTTCCAGTTGTCGAGTTGCAGAGGCACCAGGCAAGTGTGAATGCCATTGCTTGGGCACCACATAGTTCTTGCCATATCTGTACAGCTGGGGATGATTCACAGGCTTTGATTTGGGACCTTTCTTCGATGGGTCAGCCTGTGGAGGGTGGTTTGGACCCGATTCTTGCGTACACGGCTGGTGCAGAGATTGAGCAGCTTCAGTGGTCATCTTCTCAGCCAGATTGGGTTGCCATTGCTTTCTCCACAAAGCTTCAGATTCTGAGGGTCTGA 1104 0.5589 MGASSDPTQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNKVEIVQLDDSTGEIRSDPALSFEHPYPPTKAIFIPDKDCSRPDLLATSSDFLRVWRLPDSTNSDDAATTTANNNGNGSRGVGGGVELKSLLNGNKNSEFCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEKEAVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02181 367 ProSiteProfiles Trp-Asp (WD) repeats profile. 284 320 IPR001680 GO:0005515
Adu06g02181 367 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 284 320 - -
Adu06g02181 367 SMART WD40_4 71 112 IPR001680 GO:0005515
Adu06g02181 367 SMART WD40_4 140 185 IPR001680 GO:0005515
Adu06g02181 367 SMART WD40_4 277 317 IPR001680 GO:0005515
Adu06g02181 367 SMART WD40_4 188 226 IPR001680 GO:0005515
Adu06g02181 367 PANTHER WD REPEAT CONTAINING PROTEIN 13 367 IPR045159 -
Adu06g02181 367 Pfam WD domain, G-beta repeat 284 317 IPR001680 GO:0005515
Adu06g02181 367 Pfam WD domain, G-beta repeat 195 226 IPR001680 GO:0005515
Adu06g02181 367 ProSitePatterns Trp-Asp (WD) repeats signature. 304 318 IPR019775 -
Adu06g02181 367 Gene3D - 13 366 IPR015943 GO:0005515
Adu06g02181 367 SUPERFAMILY WD40 repeat-like 30 360 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02181 Adu-Chr6 91590747 91593653 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02181 K11805 - gmx:100818850 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g02181 06 91590747 91593653 Adu06g02181 06 91590747 91593653 ECH