Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02086 ATGCAGACTAGGACGGTTCAAGTGAAGCAACTCTCAGATCTAGCCGGTGAGAGAGAGATTCACGAGTTCTTCTCTTTCTCCGGAGAAATTGAGCACATTGAGATCTTGAGTGAACATGGGAAATCAAAGACTGCATTTGTGACATTTAAAGACCCCAAAGCGCTTGAAATTGCATTATTGTTATCAGGAGCAACAATAGTAGATCAGATTGTGAGTATAACACCAGCTGAGAACTATGTACCGAATTCTGAGTTGCAGGAAGTACAAAAGGTGGAAAATGCTGTAAGTGTAGCACCATCCGGAGATGTTATGCTGAATAGCGAGGAGGGGAAAACCAGCCCCACCAATGGAAGAATGTACCTTAATAGAGCACAGGATGTAGTTACGAATATGCTGGCAAAAGGTTCAGCAATCAGACAAGATGCTGTTAATAAAGCTAAAGCATTTGACGAAAAGCATCAGTTGACTGCTAATGCATCGGCGAAGGTCATTTCCTTTGACAAGAGAGTTGGACTCACAGAAAAGTTGACAGTTGGAATTTCTGCAGTGAATGAGAAAGTGAAGAGCGTGGATCAGAAGCTTCATGTTTCCGATAAAACGATGGCAGCGATATTCGCAGCTGAGAGGAAGTTGAATGATACAGGATCAGCTGTCAAAACTAGCAGGTATGTGACTGCCGGAACGGCATGGTTAAATGGTGCTTTTAGCAAGGTGGCGAAAGCCGGACATGTTGCCAGTACTAAAACAAGAGAAAAGTTTCATTTCGCTGTTTCAAACTTGACTGCTAAGGTTGGCTTTGCTCTTGCA 807 0.4312 MQTRTVQVKQLSDLAGEREIHEFFSFSGEIEHIEILSEHGKSKTAFVTFKDPKALEIALLLSGATIVDQIVSITPAENYVPNSELQEVQKVENAVSVAPSGDVMLNSEEGKTSPTNGRMYLNRAQDVVTNMLAKGSAIRQDAVNKAKAFDEKHQLTANASAKVISFDKRVGLTEKLTVGISAVNEKVKSVDQKLHVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGTAWLNGAFSKVAKAGHVASTKTREKFHFAVSNLTAKVGFALA 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02086 269 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 66 IPR000504 GO:0003723
Adu06g02086 269 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 264 - -
Adu06g02086 269 SMART rrm1_1 5 74 IPR000504 GO:0003723
Adu06g02086 269 Gene3D - 1 88 IPR012677 -
Adu06g02086 269 PANTHER RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED 1 264 - -
Adu06g02086 269 SUPERFAMILY RNA-binding domain, RBD 2 83 IPR035979 GO:0003676
Adu06g02086 269 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02086 Adu-Chr6 87291732 87294408 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02086 - - gmx:100779011 434.106