Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02014 ATGTACAACAGCAACAACAACAGTAACAGCAACATCCTGGCGTCTCGGACGAGCTCGCGGTCGGTGACGGAAACTGTTAACGGCTCTCACAAGTTTGTAATCAAAGGTTACTCTCTGGCAAAGGGGATCGGAGTTGGGAAGCACATAGCGAGCGAGACCTTCAGCGTTGGAGGGTACCAGTGGGCCATATACTTCTACCCTGACGGCAAGAACCCTGAGGACAACTCCGCCTATGTCTCTGTCTTCATCGCCCTCGCCAGTGACGGTACCGACGTTAGGGCACTCTTTGAGCTCACCCTCCTCGACCAGAGTGGCAACGGCAAGCACAAGGTCCACAGCCACTTTGACCGCTCCCTCGAAAGCGGTCCCTACACTCTCAAGTACCGCGGCAGCATGTGGGGCTATAAACGATTTTTCAAACGAGCTCAGCTCGAGGCATCAACCTTCCTCAAGGATGACTGCTTGAAAATAAACTGCACAGTTGGTGTTGTGGTGTCATCCATAGACTGTTCAAAGTTAAACACAATACAAGTTCCTGAATCTGATATTGGGGCACATTTTGGCATGCTGTTAGAAAATGAAGAAGGCTCTGATGTTACCTTTTCTGTACATGGAGAAAGGTTTCATGCACATAAGCTTGTACTAGCTGCTCGGTCAACTGCATTTGAAACAGAGTTTTTCAATGGGATGGATGAAAATGATCAGGAGATAGTTGTTACTGACATGGAACCTAAGGTTTTCAAGGCATTGCTTCATTTTATTTATAGAGACACTCTTATAGAAGATGAAGAGCTCTTTATGTCACGGTCAACATTCTTTGCTTCAATATCCGACTCATTTGCAGCAAAATTGTTGGCTGCTGCTGAAAAGTATGATTTGCCAAGACTGAAGCTGATGTGCGAGTCCGTAATCTGCAAAGACATATCTATTGATTCTGTTGCCTATATATTGGCCCTTGCTGATCGTTATCATGCTACAGAACTGAAGTCTATTTGCCTCCAGTTTTCTGCTGAAAACCTTGTTGCTGTGATGCAATCTGAGGGTTTTGAGTACCTTAAGGAACATTGTCCTTTGCTACAATCAGAACTACTAAAGACAGTGGCCGGATGTGAGGAGGAATTTAGTGGAGAAGGAAAATGTAAAAGTGTGTGGGCCCAGTTTTCTGATGGTGGTGACACCAATGATAGGAGTGAGTCCAGGGCAAGAAGCTTGACGAGTTGTAGGGACGCAAAACAATGTAACGTTGATATGTTGTGTGGAATCCTGTTGAGAACATTATAA 1281 0.4543 MYNSNNNSNSNILASRTSSRSVTETVNGSHKFVIKGYSLAKGIGVGKHIASETFSVGGYQWAIYFYPDGKNPEDNSAYVSVFIALASDGTDVRALFELTLLDQSGNGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFKRAQLEASTFLKDDCLKINCTVGVVVSSIDCSKLNTIQVPESDIGAHFGMLLENEEGSDVTFSVHGERFHAHKLVLAARSTAFETEFFNGMDENDQEIVVTDMEPKVFKALLHFIYRDTLIEDEELFMSRSTFFASISDSFAAKLLAAAEKYDLPRLKLMCESVICKDISIDSVAYILALADRYHATELKSICLQFSAENLVAVMQSEGFEYLKEHCPLLQSELLKTVAGCEEEFSGEGKCKSVWAQFSDGGDTNDRSESRARSLTSCRDAKQCNVDMLCGILLRTL 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02014 426 CDD MATH 28 161 IPR002083 GO:0005515
Adu06g02014 426 Pfam BTB/POZ domain 189 306 IPR000210 GO:0005515
Adu06g02014 426 Gene3D Potassium Channel Kv1.1; Chain A 173 302 IPR011333 -
Adu06g02014 426 SUPERFAMILY TRAF domain-like 24 163 - -
Adu06g02014 426 MobiDBLite consensus disorder prediction 1 20 - -
Adu06g02014 426 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 26 165 IPR008974 GO:0005515
Adu06g02014 426 Gene3D - 307 381 - -
Adu06g02014 426 ProSiteProfiles BTB domain profile. 197 263 IPR000210 GO:0005515
Adu06g02014 426 CDD BTB_POZ_BPM_plant 183 305 - -
Adu06g02014 426 CDD BACK_AtBPM-like 305 366 IPR034090 -
Adu06g02014 426 SMART BTB_4 197 308 IPR000210 GO:0005515
Adu06g02014 426 SUPERFAMILY POZ domain 176 306 IPR011333 -
Adu06g02014 426 SMART math_3 32 144 IPR002083 GO:0005515
Adu06g02014 426 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 12 381 IPR045005 GO:0016567
Adu06g02014 426 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 4-LIKE 12 381 - -
Adu06g02014 426 ProSiteProfiles MATH/TRAF domain profile. 27 161 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02014 Adu-Chr6 85477685 85480545 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02014 K10523 - gmx:100809683 736.873