Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g02000 ATGCATAGAGGACGCGTGACACCCTCTCTCTTTCTCGCCGTCTACGATAGAAAAAGCAGCAGGAGAGCAGCGTTGAAGTCAGGCCTTGGATGCGTATCGCCACTCCAGCATCTTGCCATGGCCGAGAAAGAGCTATCAGCATCTCGCCATCGCCGAAAAAGAGCTGTCAGCATTTTGCCATGTTCAAGAAGCCTTCGTCACCACCAATGGGTCCAACGCACAAGATTTGGAAACACAACAAAAATGTCATTGAGAATCATCTTTCAGATCCTTTTCTACTTGCATTTGCTCCTAACAGCAGCCACAGTGATCTTCATCACTGTTTATGGCCTGACCTCGGAATCTGGCGGCCAACATTTCCACCCTTTGAAGTGGTACCCTCCAGTTCTAGCTTCGACGGCATGTGGCGGAGTAATCAGTTTCCTGTGGCAATGGATCACTTTCAGCTACCCAAGAAACGCACTCAAGGCAGCATTTTGGCTAGGTCCGTTGCTAACATGTTTAATGGCTGGGATGTTTGTGTACATAGGCACTGCAACTAGTCTTATAGTGGGATTAGTTTCTTTCTGTTCTGCATTAGCTCAATCCCTCTATGGTTGTTGGGTCAGACCCAGATTCGAATACGCGACAAATATCTTGTCAGTTTCAACAGCTTTTCCACCTGCTAAAACCGGAGTGTCGGTACTCACGACAATTGTAATTGGAACCCTTTATTGCTGTTTTCTTGTATCCGGGATCGGTGGAGCTACAGCCCTTCAAGACAAATTCAAATTAGCTTTCATTTTCATCTTGGTGATTATGCTGAGCCTGGGATGGACCATGCAGTTTCTCAAGAATGTAATACAACTCACCATTTCAAGGGTCACATATCTGCAGATACTTGGAAACCCCATGGATACTTGTGCCGCGCTTCGTGACAGTATCAATCGATCTGTTGGATGTATCGCCATTGGCTCAATCCTTATCCCGGTCTTCACTCTCCTCCGCAGTTTTGGACGCTCCATGAGTCTACTTGGAGGAGAAAATGAGATCATGTTTTGCTGTGTTAGTTATTGTATGGGGATGGTAAACGTTCTTCCGAAGTTTGGGAGCCGATGGAGTTTTGTACATATTGGAGTCTATAACAAAGAGTTTGTGGACGCATCTCAAGATACTTGGGAAATCTTCACTGGAGCTAGAATGTTGCCACTCATAGACTCGGATCTAACCGGAGCATTATGTTTCCTTAGCGGAGTAGCTGTAGGTGCATTTTGTTCTATGGTGAGTGGAATTTGGATCCTTGTGATGCATCAGAGCTATGCCCTGGAAGTATCCATTTATGCTTTCTTGATTGGCTATTTCATGTGTCGATTGGCAATGGGGTGGCTACAGGCATGTGTTGCGGCATACTATGTTGCCTACGGAGAGAATCCAGTGAACGATCAATTCGACTCAACAATTCCAGCACGCTTGGAGCAGATTCAAAGATCTCAGGCTCTGTAA 1482 0.4588 MHRGRVTPSLFLAVYDRKSSRRAALKSGLGCVSPLQHLAMAEKELSASRHRRKRAVSILPCSRSLRHHQWVQRTRFGNTTKMSLRIIFQILFYLHLLLTAATVIFITVYGLTSESGGQHFHPLKWYPPVLASTACGGVISFLWQWITFSYPRNALKAAFWLGPLLTCLMAGMFVYIGTATSLIVGLVSFCSALAQSLYGCWVRPRFEYATNILSVSTAFPPAKTGVSVLTTIVIGTLYCCFLVSGIGGATALQDKFKLAFIFILVIMLSLGWTMQFLKNVIQLTISRVTYLQILGNPMDTCAALRDSINRSVGCIAIGSILIPVFTLLRSFGRSMSLLGGENEIMFCCVSYCMGMVNVLPKFGSRWSFVHIGVYNKEFVDASQDTWEIFTGARMLPLIDSDLTGALCFLSGVAVGAFCSMVSGIWILVMHQSYALEVSIYAFLIGYFMCRLAMGWLQACVAAYYVAYGENPVNDQFDSTIPARLEQIQRSQAL 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g02000 493 Pfam Plasma-membrane choline transporter 188 471 IPR007603 GO:0022857|GO:0055085
Adu06g02000 493 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 77 491 IPR007603 GO:0022857|GO:0055085
Adu06g02000 493 PANTHER F20H23.27 PROTEIN-RELATED 77 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g02000 Adu-Chr6 85041812 85044593 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g02000 - - aip:107648347 785.793