Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01955 ATGGCCACTGTCTTTAGAACCCCCATTCTCCGGCCACCTATCCTGCCGCCGCGCTCCTCCTCCTCTTCTGCCGCCGCCGCCACCAAGCCCTCATGCGTTGCCTTTCCCTCTTTCAGACAAACTGCTACCCGCAGAAGGACCACTTTGCCCCTCACCACTTTGCGGTTCCCTTCAATTCCTTCCCTGCGCTTCACGAAGTTCGCCCCTTCCGCTTTCGAAGGAGACACCGAGTTCTCGCCTCAAGTTCAAGAGCCTGAGGTTCAGCTTGAGGATGGTGCTGTTGATGTAGAGGACAGTGCTGGCCATAATGAGGTTAGCGAGGCTGATGAAAGTGAGGAATCTTCACCCTTGCAAGAGGTACTGCAAACTTACAAAGAAGCGGTAGCTAATAATAATGAAGCCATAGTTGCTGAGCTGGAATCATATTTGAAGTCCATTGAAGATGAGAAAATAGGTCTTGAAAGGAAAATAGCTTCGATATCTGCAGAGTTATCAATAGAGAAGGATAGGATTCTAAGGATTAGTGCAGACTTTGACAATTTCCGGAAGAGAACCGAGAGAGATCGCCTTTCTCTGGTCACTAATGCACAGGGGGAAGTTATGGAGAGCTTGTTGCCTGTATTGGATAATTTTGAGAGAGCAAAAACTCAGATCAAGGTGGAGACAGAAGGAGAGGAGAAAATAAACAACAGCTATCAGAGCATATATAAACAGTTCATGGAAATTCTTACTGCACTTGGAGTTGAACCAGTTGAGACAGTTGGAAAACCCTTTGATCCATTGCTACATGAAGCAATTATGCGCGAGGATTCAACTGAGTTTGAGGATGACATCATAATCCAAGAATTTAGGAAAGGTTTTAAACTTGGTGACCGACTTTTGCGACCATCAATGGTGAAGGTATCAGCTGGTCCGGGACCTGCAAAGCCTGAGCAAGCTCAGCAAGTGGAGCAAGTCGCAAGTGAAAATTCTGAGGCTCTTAAAGAAAACAATGTTTTGAACAAATTTTTCAGCTTTCATGGCCTTGGTAGAGATGACTAA 1041 0.4601 MATVFRTPILRPPILPPRSSSSSAAAATKPSCVAFPSFRQTATRRRTTLPLTTLRFPSIPSLRFTKFAPSAFEGDTEFSPQVQEPEVQLEDGAVDVEDSAGHNEVSEADESEESSPLQEVLQTYKEAVANNNEAIVAELESYLKSIEDEKIGLERKIASISAELSIEKDRILRISADFDNFRKRTERDRLSLVTNAQGEVMESLLPVLDNFERAKTQIKVETEGEEKINNSYQSIYKQFMEILTALGVEPVETVGKPFDPLLHEAIMREDSTEFEDDIIIQEFRKGFKLGDRLLRPSMVKVSAGPGPAKPEQAQQVEQVASENSEALKENNVLNKFFSFHGLGRDD 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01955 346 Gene3D Head domain of nucleotide exchange factor GrpE 247 302 IPR009012 GO:0006457
Adu06g01955 346 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 153 247 IPR013805 -
Adu06g01955 346 MobiDBLite consensus disorder prediction 98 118 - -
Adu06g01955 346 CDD GrpE 168 301 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Adu06g01955 346 PANTHER GRPE PROTEIN HOMOLOG 23 319 - -
Adu06g01955 346 ProSitePatterns grpE protein signature. 258 301 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Adu06g01955 346 PANTHER GRPE PROTEIN 23 319 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Adu06g01955 346 Pfam GrpE 147 302 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Adu06g01955 346 PRINTS GrpE protein signature 172 188 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Adu06g01955 346 PRINTS GrpE protein signature 255 270 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Adu06g01955 346 PRINTS GrpE protein signature 282 301 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Adu06g01955 346 PRINTS GrpE protein signature 200 215 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Adu06g01955 346 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 248 304 IPR009012 GO:0006457
Adu06g01955 346 Gene3D - 136 245 IPR013805 -
Adu06g01955 346 Coils Coil 136 163 - -
Adu06g01955 346 Hamap Protein GrpE [grpE]. 97 303 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01955 Adu-Chr6 82654999 82657760 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01955 K03687 - gmx:100820521 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01955 06 82654999 82657760 Adu06g01955 06 82654999 82657760 ECH