Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01909 ATGGCAACTAACGAGAATCTTCCCCCAAATGTAATAAAGCAACTTGCCAAAGAGCTCAAAAATCTTGATGAATCCCCGCCAGAAGGGATTAAGGTTGTGGTAAATGATGATGATTTTTCAATCATTTATGCCGATATTGATGGTCCAGCTGGAACTCCCTATGAGAATGGAGTTTTCCGCATGAAGTTGTTACTGTCCCATGATTTTCCGCATTCTCCACCTAAAGGTTACTTCATGACCAAGATTTTTCACCCAAATATTGCAACCAATGGAGAGATTTGTGTGAACACGCTTAAAAAAGATTGGAACCCGAGCCTTGGGTTACGCCATGTTCTTATTGTTGTTAGATGTCTATTGATTGAACCCTTTCCAGAATCAGCTCTAAATGAGCAGGCTGGCAAGCTGCTGCTTGAAAATTATGAGGAATATGCTAGACTTGCTAGGCTTTACACTGGAATTCATGCAAAAGCAAAACCCAAATTTAAAAGTGGAGCTATTTCTGAATCGACAACCGCCCTAAATGTTGATCAAACAAACACCTCAGTGCCTAACGCTGAAATAAAAACTGCTCCATCAAGTGCAGCCCTGCCATTGCAGTCTTTATCCTCCTCAACCACCACGACAAGAGGAAACAGTCAAGAACAGGCAGCAGTTGTGGTGACTGAGACTACTGTTAATGGTTCTGCCGCCACCGGTAAGGCAGTTTCTTCTGCTTCAGCACCACTAAAGAGGGAAGGTGGAGTCGCAAAAGCTCAGGCAGACAAGAAGAAGATAGATGCCAGAAAGAAGAGTTTGAAAAGATTGTAA 807 0.4263 MATNENLPPNVIKQLAKELKNLDESPPEGIKVVVNDDDFSIIYADIDGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFMTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKLLLENYEEYARLARLYTGIHAKAKPKFKSGAISESTTALNVDQTNTSVPNAEIKTAPSSAALPLQSLSSSTTTTRGNSQEQAAVVVTETTVNGSAATGKAVSSASAPLKREGGVAKAQADKKKIDARKKSLKRL 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01909 268 Coils Coil 248 268 - -
Adu06g01909 268 Pfam Ubiquitin-conjugating enzyme 15 150 IPR000608 -
Adu06g01909 268 CDD UBCc 12 151 IPR000608 -
Adu06g01909 268 SMART ubc_7 13 156 - -
Adu06g01909 268 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 10 156 IPR000608 -
Adu06g01909 268 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 22-LIKE 4 262 - -
Adu06g01909 268 MobiDBLite consensus disorder prediction 229 268 - -
Adu06g01909 268 Gene3D Ubiquitin Conjugating Enzyme 4 158 IPR016135 -
Adu06g01909 268 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 83 98 IPR023313 -
Adu06g01909 268 SUPERFAMILY UBC-like 5 160 IPR016135 -
Adu06g01909 268 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 4 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01909 Adu-Chr6 80461002 80464993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01909 12 105 Miscellaneous Gene Families AT2G33770 29.167 7.14e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01909 K10583 - gmx:100801681 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01909 06 80461002 80464993 Adu06g01909 06 80461002 80464993 ECH