Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01907 ATGGCTTCCGATGCTGATATGGAGGACTATGGATTTGAGTACTCTGATGAGGAGCAAGAGGAGCAAGATGTTGATATTGAGAATCAATATTATAATTCGAAAGGTTTGGTTGAAACTGATCCAGAAGGTGCACTTTCTGGTTTTGCTGAGGTAGTGCGCATGGAACAAGAAAAGGCTGAATGGGGATTTAAAGCTCTAAAACAAACTGTCAAGCTCTACTATCGACTTGGGAGGTATAAAGAGATGATGGAAGCCTACAGGGAGATGTTGACTTATATTAAGTCTGCAGTGACTCGTAATTACAGTGAAAAATGCATAAACAGCATTATGGACTATGTCTCAGGTTCAGCTAGCCAGAACTTTGGTCTTCTGCAAGAATTCTACCAGACAACTTTGAAAGCCCTTGAAGAAGCAAAGAATGAGAGATTGTGGTTTAAGACAAATCTGAAGCTTTGTAAGATTTTCTTTGATATTGGTGAATATGGACGAATGAGCAAGATCTTGAAGGAACTTCACAAATCTTGTCAAAGAGAAGATGGCACAGATGACCATAAGAAAGGAACCCAACTGTTGGAGGTTTATGCAATAGAAATCCAGATGTACACAGAGACCAAGAACAACAAAAAACTCAAGCAACTTTACCAGAAAGCACTTACTATTAAGTCAGCTATTCCCCATCCAAGAATAATGGGGATAATCCATGAATGTGGGGGTAAAATGCATATGGCAGAGCGCCAGTGGGCAGAAGCAGCTACTGACTTCTTTGAAGCTTTTAAGAATTATGATGAAGCTGGGAATCATAGGCGGATCCAATGCTTGAAGTACCTTGTTCTTGCCAACATGTTGATGGAGTCTGAAGTGAATCCTTTTGATGGACAGGAGGCTAAGCCATACAAGAATGACCCGGAAATTTTGGCAATGACAAATTTGATAGCAGCCTATCAACGGAATGAAATATTGGAATTTGAGAAAATACTGAAGAGTAACAGAAGAACCATCATGGATGATCCATTTATCAGAAATTACATTGAGGATCTGCTGAAGAATATCAGAACACAAGTCTTGCTTAAGCTCATCAAACCATATACAAGGATAAGGATACCATTTATATCTCAGGAACTGAACGTTCCCGAACATGATGTTGAGCAGCTGCTTGTGTCACTGATTCTGGATAATAGAATTCAAGGACACATTGATCAAGTGAACAGGCTCTTGGAACGTTCTGATAGGTCTGTTTATATATATTATAATTATTTCAATTTTTTTCAACTGTATTCTGTTTATAATCTGCTATTTTATGGTATTAATTGA 1311 0.3837 MASDADMEDYGFEYSDEEQEEQDVDIENQYYNSKGLVETDPEGALSGFAEVVRMEQEKAEWGFKALKQTVKLYYRLGRYKEMMEAYREMLTYIKSAVTRNYSEKCINSIMDYVSGSASQNFGLLQEFYQTTLKALEEAKNERLWFKTNLKLCKIFFDIGEYGRMSKILKELHKSCQREDGTDDHKKGTQLLEVYAIEIQMYTETKNNKKLKQLYQKALTIKSAIPHPRIMGIIHECGGKMHMAERQWAEAATDFFEAFKNYDEAGNHRRIQCLKYLVLANMLMESEVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEILEFEKILKSNRRTIMDDPFIRNYIEDLLKNIRTQVLLKLIKPYTRIRIPFISQELNVPEHDVEQLLVSLILDNRIQGHIDQVNRLLERSDRSVYIYYNYFNFFQLYSVYNLLFYGIN 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01907 436 Pfam PCI domain 306 406 IPR000717 -
Adu06g01907 436 SMART PINT_4 341 431 IPR000717 -
Adu06g01907 436 ProSiteProfiles PCI domain profile. 243 412 IPR000717 -
Adu06g01907 436 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 1 413 - -
Adu06g01907 436 PANTHER - 1 413 - -
Adu06g01907 436 MobiDBLite consensus disorder prediction 1 22 - -
Adu06g01907 436 Gene3D - 50 409 - -
Adu06g01907 436 SUPERFAMILY "Winged helix" DNA-binding domain 335 409 IPR036390 -
Adu06g01907 436 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 341 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01907 Adu-Chr6 80402894 80409398 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01907 K12176 - gmx:100779900 795.423