Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01885 ATGAACCTGTTGTCAAGCTTCTTTAGACACCAAAACTCTCACCCTTTCACCCCTTTCCTCTTTCTCCAAAGAAGATGGAAGAAACCAACGATCTCTGCACAAACCCGTTTAGAAGACAGGGTTCGAGACACTCACCTCGATAACCTTGTATCCTGCATGTCCAAGCTCAGACTCATCCTTGGAATCCACACCTTCATGTCTTCCCGGAAGCGTGGAACCTTCGTTTCCCTGCAGCTCATGTCCCGCTGGAGGAACATCCTCGGACTCAACATCCCTATTGGCTCCTTCCTCCGCAAGTACCCACACATTTTCGAGGTGTTCCTTCACCCCGTAAGGAAGAACCCGTGTTGCAGGGTCACAAGGAAGATGAAGGAGCTGGTCCTAATGGAACGTGTTGTTGTGAGGAACAATGAGTTGGAGGTTGTGAAGAGGGTGAAGAAGCTTCTTATGATGTCAGTGAATGGCACACTTCGTGTTCATGCTTTGAGGATGATTAAAAGGGAACTTGGTTTGCCTGATGATTTCCGAGACTCAATTTTGGGAAAGCATAGTGATGACTTCAGGTTGGTTGGCTTGGAGGTTGTGGAATTGGTTTGTGAAAATGGTGAATTTGGGGTTGTTGCTGAAGTTGAGAAATGGAGGGAAAAAGAATACACTGAAAAATGGTTGAGTGAGTTTGAGACAAAGTTTGCATTCCCAATTAACCTCCCAACAGGTTTCAAGATTGAGAAAGGATTTAGAGAGAGATTGAAGAATTGGCAGAGGCTTCCTTATACTAAGCCTTATGAGAGCAAAGAGGCCATAAGGGTTAGAAACTCGGGCAGTATTGATCGGTATGAGAAGAGAGCTGTTGCTGTTCTTCACGAGCTTTTGAGCATGACTGTCGAGAAGATGGTTCATGTCGATCATTTGGTGCATTTTCGTAGGGATTTCGCAATCGAGGTTAATCTGCGCGAGTTGTTGCTGAAGCACCCTGGGATATTCTACATATCCACAAAGGGGAAAACTCAGACTGTTATTCTTAGGGAGGTATATAGGAAGGGGAGTTTGATTGAGCCTAATCCTGTTTACACTGCTCGGAGGAACATGTTGGAGCTTGTGTTGTTGCGGCATAGGAAGACAAAACAAATGGTAGATTTTGATGAATCGAGTAAAGGGGGTAACAGTGTGGTATGTAAAGCGAATGAAGGAGTTAAAAGAGAAGGAGATTGGGTGATTCCGTTCTTGGAGAGTTGTGAGGAGAAGAGGTCATTTTGA 1257 0.4495 MNLLSSFFRHQNSHPFTPFLFLQRRWKKPTISAQTRLEDRVRDTHLDNLVSCMSKLRLILGIHTFMSSRKRGTFVSLQLMSRWRNILGLNIPIGSFLRKYPHIFEVFLHPVRKNPCCRVTRKMKELVLMERVVVRNNELEVVKRVKKLLMMSVNGTLRVHALRMIKRELGLPDDFRDSILGKHSDDFRLVGLEVVELVCENGEFGVVAEVEKWREKEYTEKWLSEFETKFAFPINLPTGFKIEKGFRERLKNWQRLPYTKPYESKEAIRVRNSGSIDRYEKRAVAVLHELLSMTVEKMVHVDHLVHFRRDFAIEVNLRELLLKHPGIFYISTKGKTQTVILREVYRKGSLIEPNPVYTARRNMLELVLLRHRKTKQMVDFDESSKGGNSVVCKANEGVKREGDWVIPFLESCEEKRSF 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01885 418 Pfam Plant organelle RNA recognition domain 41 371 IPR021099 GO:0003723
Adu06g01885 418 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 10 415 - -
Adu06g01885 418 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 10 415 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01885 Adu-Chr6 79728092 79731271 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01885 - - vun:114194999 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01885 06 79728092 79731271 Adu06g01885 06 79728092 79731271 ECH