Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01875 ATGGCCAAGGCCGTCGTCTCTGACGAAGAAGATGAGGTCGAGTACGAGGAGGAAGAGAGGGACCCCGCTGATGGAGATGGTTTGGAAGACGGTCGGGATGTGGACGATGACGATGAGGAAGATGAAGAAGAAGGGCAGGATGAATATGAAAATGATGGATTTATAGTGGATGATGTTGAAGATGAAGATGAGCAAGATGAAGAGAGGCCAGAAAGTGATGATGAGCGGCAGAAGAAGAAAAAGAGGAAGAAAAAGGAGGAGTATGTCCTTGATGAAGATGATTATGAGTTGTTGGAGGATAATAACATCAATATTCATCGTCGGAAGGAGAGCAAAAAGTTCAAACGGCTGAAAAAAGGTCGGAGGGATACCGAGGAGGAGCCCTCTGGATTATCTGGTGAAGAGTTTGATGGGAGTGGTAAAGTTGGGCGAACTGCTGAGGAGAAGCTTAAACGCAGTTTATTTGGTGATGATGAAGGAGCTCCACCTGAAGACATTGTTGAAGAAGAGGAACAAGGAGAGGAGGAGGAGGAGGATGCAGACATTGGAGAAGATGATGAAATGGCTGACTTCATTGTGGATGAAGACGTAATGGATGAGAATGGAGATCTTGTGAGACGAAGGAAGCTGAAGAGAAAGAAAACTAGGCAGGCACCAGGTGTCTCTTCATCAGCTTTGCAAGAAGCACAAGAGTTATTTGGTGATGTGGAAGAATTGCTGCAGAACCGCAAGCACAAACTGGAATCGAATGAATATAGAGAAACTAGACTTGAGGATGAATTTGAGCCTATTGTCCTTTCAGAGAAGTATATGACAGAGAAAGATGACCAGATAAGGGAGCTAGACATTCCGGAGAGAATGCAGATATCTGAGGAGAGTACCGGTGCTCCTCCTATGGATGGAGGTATTTTAGAAGAGGAGAGCCAATGGATAGTTAGCCAACTTGGCAATGGTGCAGTCCCTTGGATTTCCAAGAAAATCACAAGCAATCAAAATGGGGCTAAGGAACTACCAATTGAGAAGGATGATATTTTAAGATTTTTGGAAATGCATCATGTGCAGAAATTAGATATTCCTTTTATTGCTATGTATCGGAAGGAGGAGTGCTTAAGCTTATTAAAAGACCTTGAGCGATCTGAAGATGGTGATGAGAATTGGGATAAGAATAACAAGACACCTACTTTAAAATGGCACAAGGTTCTCTGGGCTCTACAGGATTTGGACAGGAAGTGGTTACTTCTTCAGAAGAGGAAGAGTGCCCTTCAGCAATACTATAGAAAACGATTTGAAGAAGAGTCACGCCGTGTTTATGAGGAAACACGACTAAACTTGAACCGGCAGTTGTTTGAATCTGTTATGAGATCCCTGAAGGAGGCGGAATCTGAGAGGGAAGTTGACGATGTTGACTCCAAGTTCAACTTGCACTTTCCACCAGGTGAAGTTGGTGTTGATGAAGGCCAATACAAGAGGCCAAAAAGGAAGTCTATGTATAGCACTTTCAGTAAGGCAGGTCTGTGGGAGGTTGCAAGCAGGTTTGGGTGCAGTGCTGAGCAACTTGGGTTATGTCTCTCACTTGTTGCTCTGCATGAGTTGGAGGATCCAAAGGAAACACCAGAGGAGATGGCTTCAAATTTTACATGTACCATGTATGATACCCCTCAAGAAGTACTTAAGTGTGCTAGGCACATGGCAGCCGTTGAGATAAGTTGTGAGCCTAGCATTAGGAAGCATGTTCGCACTCACTTTCTTGATCATGCGGTGGTGTCTACCTGTCCTACTGCTGATGGAAATACAACAATAGATTCTTTCCATCAGTTTGCTGGTGTGAAGTGGCTGCGCGAGAAGCCATTGTCTAAGTTTGAGGATGCCCAATGGCTCCTTATACAGAAGGCAGAGGAGGAGAAACTTCTCCAAGTTACTATTAAGCTTCCTGAAGAGTATCTTAATAAGTTAATAGACCAATTTAATGAGTATTATATTAGTGATAGTGTTAGTAGATCTGCTCAGCTGTGGAATGAACAGAGGAAGCTGATATTGAATGATGCAATCTTTCGGTTTCTCTTACCATCTATGGAAAAGGAGGCAAGAGGTGTTTTGTCAAGCAAGGCAAAGAATTGGTTACTTATGGAGTATGGGAAGGCATTATGGAGTAAGGTTTCTGTGGGGCCTTATCAGCAGAAGGAAAATGATCTTAGCTCTGATGAAGAGGCCGCTCCTAGGGTTATGGCATGTTGTTGGGGCCCTGGCAAACCACAGACAACTTTTGTTATGTTGGATTCTTCAGGAGAAGTGCTAGATGTGCTTTACACTGGGTCTCTTACTTTTAGATCACAGAATGTCAATGACCAACAACGGAAGAAGAATGACCAGGAACGCGTGCTGAAGTTTATGACAGATCACCAACCACATGTTGTTGTTTTGGGAGCTGTAAATTTGTCTTGCACTCGTCTAAAGGAAGATATATATGAGGTCATTTTTAAGATGGTAGAGGAAAACCCTCGAGATGTTGGGCATGAAATGGATGGGCTCAGCATTGTGTATGGGGATGAATCTCTTCCCCGTCTTTATGAAAATTCACGAATTTCCTCCGAACAACTTCCTTCCCAACAAGGTATAGTGAGGCGGGCTGTTGCACTTGGTCGATATCTTCAGAACCCATTGGCAATGATTGCAACATTATGTGGACCTAGAAAGGAAATATTATCATGGAAACTGAGCTCTTTAGAGAGCTTTCTTAACCCAGATGATAAGTTTGCTATGATTGAGCAAGTTTTGGTAGATGTGACTAATCAGGTTGGATTAGATATTAATCTGGCGATAAATCATGAGTGGTTATTTGCACCATTGCAATTTGTTTCCGGGCTTGGTCCACGAAAGGCTGCATCCTTGCAGAGATCATTGGTGAGAGCTGGTGCAATTTTTACTCGGAAAGACTTCCTGACAGAACATAAACTGGGTAAAAAGGTGTTTGTCAATGCAGTTGGGTTTTTGCGTGTACGACGAAGTGGGTTGGCTGCTAGCAGCAGCCAGTTTATTGATTTGCTGGATGATACAAGAATCCATCCAGAATCATATAGTCTTGCTATAGAGTTGGCTAAAGATGTCTATGAGGAGGATGGAACAGGTGATGCAAACGATGATGATGATGCTGAGATGGCCATTGAGCATGTGAGAGACCGGCCTAGCTATTTGAAAAACCTAGACGTCGAGGAATATGCTGCTGGAAAGAAACGCCAGAACAAGATAGAAACTTTCTATGACATAAAAAGAGAACTGATTCAAGGTTTCCAGGAATGGCGTAAGCAATATGAAGAACCAAGCCAGGATGAGGAGTTCTATATGATTTCAGGTGAGACTGAGGAGACTCTGGCAGAAGGTAAAATTGTCCAAGCCACTGTTCGCAGAGTGCAAGCCCAGAAAGCAATATGTGGGCTTGAATCTGGAATGACTGGAATCCTTATGAAAGAAGACTATACTGATGATTGGAGAGACGTAGTTGAACTTTCTGATAGGATACATGAGGGTGACATACTCACGTGTAAAATCAAGTCAATTCAAAAGAATAGGTATCAAGTCTTCCTTGTTTGTAGAGAGAGTGAAATGAGAAGCAACCGGTTTCAAAACAACCGTGATCTTGATCCTTACTACCATGAAGACAGAAGCTCTCTGCAGAGTGATCAAGACAAAGCTCGGAAAGAAAAGGAGCTTGCGAAGAAGCATTTCAAGCCGAGGATGATTGTCCATCCACGCTTTCAAAATATAACTGCTGATGAAGCAATGGAGTTCTTGTCTGACAAAGACCCTGGGGAAAGCATTATTCGTCCTAGTTCACGTGGACCTTCATATCTTACTTTAACGCTCAAAATTCATGATGGAGTGTATGCCCACAAAGATATAGTCGAAGGTGGAAAGGAACATAAGGACATTACAAGCTTGCTTCGAATTGGGAAGACACTCAAAATTGGAGAGGACACTTTCGAGGATTTAGATGAGGTTATGGACCGTTATGTTGATCCCTTGGTGACTCATTTAAAGGCAATGTTAAATTACCGCAAGTTCAGGAAGGGTACAAAAGCAGAAGTTGATGAACTTTTGAGGCTGGAGAAATCTGAGTATCCAATGCGCATTGTCTATAGTTTTGGCATCTCACATGAACATCCTGGAACATTTATATTAACTTATATAAGAAGTACAAATCCACATCATGAGTACATTGGACTTTATCCAAAAGGATTCAGATTTCGCAAGAAGATGTTTGAGGACATTGATCGGCTTGTGGCGTATTTTCAGAGGCATATTGATGATCCCCAGCATGATTCAGCCCCTTCCATTAGATCTGTGGCTGCTATGGTACCAATGCGAAGCCCTGCGGCTGGTGGTTCATCAGGGGGATCTACAGGTAGTGGCTGGGGAGGTTCAAACAATGAGGGTGGTTGGAGGGGTAACTCCTATGATAGGGATCGATCATCTACTCCTGGTTCTAGGACAGGACGGGGAGATTACAGACACAATAATAGAGATGAACACCCTAGCGGAGTGCCTCGTCCATATGGCGGTGGACGCGGGCGCGGACGCGGACGTGGTCGAGGTTCTTACGATAACAATAGAGGACATGGCTCCAATAATGAAAGGCAGGACTCCGGGTATGGTGGATCTAGATGGAGTTCGGCTAAAAAGGATGCAGATGATTTAAGCAATTTTCCAGGGGCTAAGGTCCAAAATTCTCCTGGAAGAGAAGCTTTCCCTGGTGGTTGGGGGGGAAGTGGTGGAGGTAGCAGCAGTGGTTGGGGAGGTGGAAATAGCGGTGATGACAACGGGGGATGGGGTGGTGGTGCAGGTCCAAGTGACACCGATAATGGAGGCTCCGGCTGGGGAGCTGGCTCTAAGAAAGCATCTGACAATGGATGGTCTGGAAATGCCGGGGGCGGCTCTGGTTGGTGA 4941 0.4416 MAKAVVSDEEDEVEYEEEERDPADGDGLEDGRDVDDDDEEDEEEGQDEYENDGFIVDDVEDEDEQDEERPESDDERQKKKKRKKKEEYVLDEDDYELLEDNNINIHRRKESKKFKRLKKGRRDTEEEPSGLSGEEFDGSGKVGRTAEEKLKRSLFGDDEGAPPEDIVEEEEQGEEEEEDADIGEDDEMADFIVDEDVMDENGDLVRRRKLKRKKTRQAPGVSSSALQEAQELFGDVEELLQNRKHKLESNEYRETRLEDEFEPIVLSEKYMTEKDDQIRELDIPERMQISEESTGAPPMDGGILEEESQWIVSQLGNGAVPWISKKITSNQNGAKELPIEKDDILRFLEMHHVQKLDIPFIAMYRKEECLSLLKDLERSEDGDENWDKNNKTPTLKWHKVLWALQDLDRKWLLLQKRKSALQQYYRKRFEEESRRVYEETRLNLNRQLFESVMRSLKEAESEREVDDVDSKFNLHFPPGEVGVDEGQYKRPKRKSMYSTFSKAGLWEVASRFGCSAEQLGLCLSLVALHELEDPKETPEEMASNFTCTMYDTPQEVLKCARHMAAVEISCEPSIRKHVRTHFLDHAVVSTCPTADGNTTIDSFHQFAGVKWLREKPLSKFEDAQWLLIQKAEEEKLLQVTIKLPEEYLNKLIDQFNEYYISDSVSRSAQLWNEQRKLILNDAIFRFLLPSMEKEARGVLSSKAKNWLLMEYGKALWSKVSVGPYQQKENDLSSDEEAAPRVMACCWGPGKPQTTFVMLDSSGEVLDVLYTGSLTFRSQNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDIYEVIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENSRISSEQLPSQQGIVRRAVALGRYLQNPLAMIATLCGPRKEILSWKLSSLESFLNPDDKFAMIEQVLVDVTNQVGLDINLAINHEWLFAPLQFVSGLGPRKAASLQRSLVRAGAIFTRKDFLTEHKLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYSLAIELAKDVYEEDGTGDANDDDDAEMAIEHVRDRPSYLKNLDVEEYAAGKKRQNKIETFYDIKRELIQGFQEWRKQYEEPSQDEEFYMISGETEETLAEGKIVQATVRRVQAQKAICGLESGMTGILMKEDYTDDWRDVVELSDRIHEGDILTCKIKSIQKNRYQVFLVCRESEMRSNRFQNNRDLDPYYHEDRSSLQSDQDKARKEKELAKKHFKPRMIVHPRFQNITADEAMEFLSDKDPGESIIRPSSRGPSYLTLTLKIHDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDPLVTHLKAMLNYRKFRKGTKAEVDELLRLEKSEYPMRIVYSFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPAAGGSSGGSTGSGWGGSNNEGGWRGNSYDRDRSSTPGSRTGRGDYRHNNRDEHPSGVPRPYGGGRGRGRGRGRGSYDNNRGHGSNNERQDSGYGGSRWSSAKKDADDLSNFPGAKVQNSPGREAFPGGWGGSGGGSSSGWGGGNSGDDNGGWGGGAGPSDTDNGGSGWGAGSKKASDNGWSGNAGGGSGW 1646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01875 1646 MobiDBLite consensus disorder prediction 9 70 - -
Adu06g01875 1646 SUPERFAMILY Nucleic acid-binding proteins 1121 1201 IPR012340 -
Adu06g01875 1646 MobiDBLite consensus disorder prediction 71 91 - -
Adu06g01875 1646 Pfam SH2 domain 1215 1432 IPR035420 -
Adu06g01875 1646 Gene3D - 294 495 IPR023319 -
Adu06g01875 1646 PANTHER TRANSCRIPTION ELONGATION FACTOR SPT6 84 1594 IPR017072 GO:0032968
Adu06g01875 1646 MobiDBLite consensus disorder prediction 1632 1646 - -
Adu06g01875 1646 MobiDBLite consensus disorder prediction 1534 1552 - -
Adu06g01875 1646 MobiDBLite consensus disorder prediction 161 188 - -
Adu06g01875 1646 CDD SH2_Cterm_SPT6_like 1347 1433 IPR035018 -
Adu06g01875 1646 SUPERFAMILY RuvA domain 2-like 910 1000 IPR010994 -
Adu06g01875 1646 Pfam Helix-hairpin-helix motif 898 999 IPR032706 -
Adu06g01875 1646 Gene3D - 729 1118 IPR037027 GO:0006139
Adu06g01875 1646 ProSiteProfiles S1 domain profile. 1126 1197 IPR003029 GO:0003676
Adu06g01875 1646 Gene3D - 1008 1099 IPR042066 -
Adu06g01875 1646 SUPERFAMILY RuvA domain 2-like 1013 1101 IPR010994 -
Adu06g01875 1646 Gene3D SH2 domain 1234 1345 IPR036860 -
Adu06g01875 1646 Gene3D - 496 932 IPR023323 -
Adu06g01875 1646 SUPERFAMILY Tex N-terminal region-like 332 717 - -
Adu06g01875 1646 SMART S1_6 1124 1197 IPR022967 -
Adu06g01875 1646 CDD SH2_Nterm_SPT6_like 1248 1336 IPR035019 -
Adu06g01875 1646 PIRSF Spt6 2 1502 IPR017072 GO:0032968
Adu06g01875 1646 SMART rnase_8s 739 857 IPR006641 GO:0006139
Adu06g01875 1646 Pfam HHH domain 1014 1093 IPR041692 -
Adu06g01875 1646 Gene3D - 261 1002 - -
Adu06g01875 1646 MobiDBLite consensus disorder prediction 140 159 - -
Adu06g01875 1646 PANTHER TRANSCRIPTION ELONGATION FACTOR SPT6 84 1594 - -
Adu06g01875 1646 MobiDBLite consensus disorder prediction 1 188 - -
Adu06g01875 1646 MobiDBLite consensus disorder prediction 1454 1646 - -
Adu06g01875 1646 MobiDBLite consensus disorder prediction 1207 1232 - -
Adu06g01875 1646 Gene3D SH2 domain 1346 1442 IPR036860 -
Adu06g01875 1646 Pfam Holliday-junction resolvase-like of SPT6 738 894 IPR028231 -
Adu06g01875 1646 Pfam Acidic N-terminal SPT6 35 123 IPR028083 -
Adu06g01875 1646 SUPERFAMILY SH2 domain 1251 1337 IPR036860 -
Adu06g01875 1646 Gene3D - 1119 1207 IPR012340 -
Adu06g01875 1646 SUPERFAMILY Ribonuclease H-like 739 894 IPR012337 -
Adu06g01875 1646 MobiDBLite consensus disorder prediction 1459 1498 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01875 K11292 - gmx:100809136 2695.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01875 06 78949017 78958755 Adu06g01875 06 78949017 78958755 ECH