Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01871 ATGGTGAATACTGGATTGCTTTCTGGAAGCAAATCAGTGAAGATTACCTTCCAGTTACCATATTTCACCCATTGGGGTCAGAGTTTGCTGGTGTGTGGTTCTGTGTCGGTGCTCGGTTCGTGGAATGTGAAGAAGGGTGTGCTGCTCACCCCCATTCATCAAGGGGCTGAGCTCATCTGGAGTGGCAGCATCACAGTGCCAAAAGGGTTCCAATGCCAATACCAATATTATGTGGTTGATGATAATAGAAATGTTCTGCGGTCTGAGATGGGGAAGAGGCGTGAATTGGTGCTCCCTGAAGGCATACAGAGTGGGCAGGAGATCGAGTTCCGTGATCTTTGGCAGACAGGCTCAGATGGTATCCCTTTCCGAAGTGCTTTTAGAGATGTTATTTTCCGGCAAAGCTGGGATCCGAGCAAAGAGGCAGCTGCCATAGAAGCCAACAATAGTAAATTTGAGCTGGAAGCGGAATCCATAGTCATTCTGTTCAGGATAAACTGCCCAAGCATTGAGAAAGACACATCAATATGTGTGATTGGAAGCCATGAAAAGTTAGGGAAGTGGAAGCCTGAAAATGGATTAAAACTCAGATATTGTGGCAAATCCATGTGGCAAGCTGAATGTCTGATGAAAAGGAGTGATTTTCCAATAAGGTATAGATATTGCAAATATGGTGGGGCTGGCAATGTTTCTATAGAGAATGGCCCGAATCGTGAAGTCTCCATTAGCTCCTCAAGGAGTGAGGCAAAATATATATGTCTTTCAGATAGCATGATGCGAGAAACACCTTGGCGTGGTGCTGGTGTGGCGATCCCTATGTTTTCTGTTAGGTCGGAATGTGATCTCGGAGTTGGAGAGTTTCTTGATCTTAAATTACTAGTAGACTGGGCTGTAGCATCCGGATTTCATTTAGTTCAACTTTTACCTATCAATGACACATCAGTTCACAGGATGTGGTGGGATTCTTATCCATACAGTTCACTATCAGTATTTGCATTGCATCCATTGTACCTGCGAGTTCAGGCACTTTCTAAGAACATACCTAAGGAGATCAAGGAAGAGATTGAGAAGGCAAAACAACAGTTGGATTTGAAGGATGTTGATTATGAGGCGACAATGGCTGCTAAACTCTCAATTGCCAAGAAAATTTTCGACCTAGAGAAAGATGCGATACTTAACTCGAGTTCCTTTAAGGAGTTTTTTGCAGAGAACGAGGGTTGGTTGAAACCCTATGCTGCCTTCTGTTTCCTGCGGGACTTTTTCGAGACATCAGATCGCACTCAATGGGGTTGTTTTGCTCATTATTCAGAAGATAAGCTTGAGAAACTTGTATCAAAGGAAAGCTTGCATTATGAGATAATTTGCTTCCAATACTATATTCAATACCATCTACACTTACAATTATCCGAAGCTGCAGAATATGCGAGAAAGAAGAGAGTGGTTCTAAAGGGAGATCTTCCTATTGGAGTTGATAGGAACAGTGTTGATACTTGGGTTTATCCAAATCTGTTCCGAATGAATACTTCCACGGGAGCACCTCCAGATTATTTTGATAAGAACGGCCAGAATTGGGGCTTTCCAACTTATAATTGGGAAGAAATGTCAAAAGACAACTATGGCTGGTGGCGAGCTCGCTTGACACAGATGGCAAAATATTTTACAGCTTATAGGATTGACCACATATTGGGATTCTTTCGAATCTGGGAGCTTCCGGATCATGCTGCCACTGGTTTAGTTGGAAAATTCCGACCATCTATTCCTCTAAGTCAGGAGGAACTCGAAAGGGAGGGCATATGGGACTTTAATCGCCTGAGTCGTCCTTACATTAGGCAGGGACTCTTGCAGCAAAAATTTGGAGCTGCTTGGGCCTTTGTTGCAACAACTTTTCTGAATGAATATGAGAAGAACTGCTATGAGTTCAAGGAGGATTGCAACACAGAGAAAAAAGTTGTTTCCAAGCTAAAAAGTTGTGCTGAAAGTTCTCTCTTGTTAGAGAGTGAAGACAAACTGCGGCGCACCCTCTTTGATCTTTTACAGAATATAGTTCTTATCCAAGATCCAGAGGATCCAAGAAAATTTTATCCTCGTTTCAACCTTGAGGATACTTCAAGCTTCAAGGATCTGGATGATAAAAGCAAGAATGTTCTCAAAAGATTATACTACGACTACTATTTCCATCGTCAAGAGAATCTTTGGAGGGAAAATGCGTTGAAGACCCTACCCGTCCTTCTGAACTCATCAGACATGCTGGCATGTGGAGAAGATTTGGGTCTTATTCCTTCTTGTGTCCATCCTGTTATGCAAGAACTGGGATTGGTTGGGTTGCGGATTCAACGCATGCCCAATGAACCTGGTCTGGAGTTTGGTATTCCTTCCCAGTACAGCTACATGACAGTATGCGCCCCGTCTTGTCACGACTGCTCCACCTTGCGTGCCTGGTGGGAAGAAGATGAAGATAGAAGACTGCGCTATTTCAAGAATGTGGTGGAGTCTGACGAGTTACCACCCGATCGATGCACTCCAGAAGTTGCACATTTTGTTATAAGGCAACATGTTGAAGCCCCATCAATGTTGGCAATTTTCCCTCTCCAGGACTTGCTAGCATTAAAAGAAGAATATACTACACGCCCCGCGACAGAGGAGACAATCAATGACCCCACAAATCCGAAGCATTATTGGAGATACCGTGTACATGCCACGCTGGAATCTTTGAACAAGGATACTGAGCTCAAAACCATCATCAAAGATCTTGTTCGTTGGGGCGGAAGATCTTTCCCCCCGGATGAAACTGAAGTATCGTCATCATCAGCATCAGGATCCAACTCCGACAAGGAGCGGCTTGCCAGTTCCATGGAAAAGATCAGTCTTCCTTCCAAATAG 2880 0.4378 MVNTGLLSGSKSVKITFQLPYFTHWGQSLLVCGSVSVLGSWNVKKGVLLTPIHQGAELIWSGSITVPKGFQCQYQYYVVDDNRNVLRSEMGKRRELVLPEGIQSGQEIEFRDLWQTGSDGIPFRSAFRDVIFRQSWDPSKEAAAIEANNSKFELEAESIVILFRINCPSIEKDTSICVIGSHEKLGKWKPENGLKLRYCGKSMWQAECLMKRSDFPIRYRYCKYGGAGNVSIENGPNREVSISSSRSEAKYICLSDSMMRETPWRGAGVAIPMFSVRSECDLGVGEFLDLKLLVDWAVASGFHLVQLLPINDTSVHRMWWDSYPYSSLSVFALHPLYLRVQALSKNIPKEIKEEIEKAKQQLDLKDVDYEATMAAKLSIAKKIFDLEKDAILNSSSFKEFFAENEGWLKPYAAFCFLRDFFETSDRTQWGCFAHYSEDKLEKLVSKESLHYEIICFQYYIQYHLHLQLSEAAEYARKKRVVLKGDLPIGVDRNSVDTWVYPNLFRMNTSTGAPPDYFDKNGQNWGFPTYNWEEMSKDNYGWWRARLTQMAKYFTAYRIDHILGFFRIWELPDHAATGLVGKFRPSIPLSQEELEREGIWDFNRLSRPYIRQGLLQQKFGAAWAFVATTFLNEYEKNCYEFKEDCNTEKKVVSKLKSCAESSLLLESEDKLRRTLFDLLQNIVLIQDPEDPRKFYPRFNLEDTSSFKDLDDKSKNVLKRLYYDYYFHRQENLWRENALKTLPVLLNSSDMLACGEDLGLIPSCVHPVMQELGLVGLRIQRMPNEPGLEFGIPSQYSYMTVCAPSCHDCSTLRAWWEEDEDRRLRYFKNVVESDELPPDRCTPEVAHFVIRQHVEAPSMLAIFPLQDLLALKEEYTTRPATEETINDPTNPKHYWRYRVHATLESLNKDTELKTIIKDLVRWGGRSFPPDETEVSSSSASGSNSDKERLASSMEKISLPSK 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01871 959 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 7 116 IPR002044 GO:2001070
Adu06g01871 959 Pfam Starch binding domain 13 105 IPR002044 GO:2001070
Adu06g01871 959 Pfam Starch binding domain 161 249 IPR002044 GO:2001070
Adu06g01871 959 Gene3D Glycosidases 720 923 - -
Adu06g01871 959 MobiDBLite consensus disorder prediction 921 959 - -
Adu06g01871 959 Gene3D Immunoglobulins 7 116 IPR013783 -
Adu06g01871 959 Gene3D Immunoglobulins 152 257 IPR013783 -
Adu06g01871 959 Gene3D Glycosidases 264 594 - -
Adu06g01871 959 CDD CBM20_DPE2_repeat2 160 256 IPR034841 GO:2001070
Adu06g01871 959 MobiDBLite consensus disorder prediction 928 945 - -
Adu06g01871 959 SMART CBM_20_2 158 252 IPR002044 GO:2001070
Adu06g01871 959 SMART CBM_20_2 12 108 IPR002044 GO:2001070
Adu06g01871 959 SUPERFAMILY (Trans)glycosidases 264 917 IPR017853 -
Adu06g01871 959 CDD CBM20_DPE2_repeat1 14 114 IPR034840 GO:2001070
Adu06g01871 959 SUPERFAMILY Starch-binding domain-like 157 246 IPR013784 GO:0030246
Adu06g01871 959 SUPERFAMILY Starch-binding domain-like 9 112 IPR013784 GO:0030246
Adu06g01871 959 Pfam 4-alpha-glucanotransferase 271 899 IPR003385 GO:0004134|GO:0005975
Adu06g01871 959 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 153 266 IPR002044 GO:2001070
Adu06g01871 959 PANTHER - 10 924 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01871 13 946 Glycoside Hydrolase AT2G40840 72.086 0.0 1441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01871 K00705 - gmx:100793021 1628.61