Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01806 ATGAGAAACACCGAAGTTATAGGGGAAAAAGAAAAACCTAAAATGATAGAAGCTCGAGCTAGCGAGATAAGGTCGAGGAGCCAACCGCGGGTGTCTTTAGCGACGGGGGAGGGGACGGAGGAGCTGAACCTAACAAGGTTGGCCATTCTATCAGTTTCGCGGGTTGATTCCGTTAACGGCGGAGAGAAGAAGGAGTCCGTTGACGGAGAGGGGAAAGCTAGAATAAATATAATCCTCCCCATGGCTCCAGTTGCTAAAAGGTTAGAGGGTAAGGTGGCAATAATCACAGGAGGTGCCGGGGCCATTGGTGCAACCACCGCAAAACTATTCCTTCAACACGGAGCTAAGGTGATCATCGCAGATGTCCAAGACGAACTGGGTATCTCTCTCTGCAAATCCCTCATCACCAAAGACGGTGCCGCTAATAACAACAACAACATCGACTACGTTCACTGTGACGTGACCTCCGAACAAGACGTCAAAAACGCGGTCGATTTGGCTGTTTCCAAATACGGCCACCTTGACATCATGTATAACAATGCCGGCACCGCCGGTGACAATATCAAGCGCCCGATGGAGAACTCCACCGTCGAAGACTTCAAGAGAATCTTCGATGTCAACGTCTTAGGGGCTTTCTTGGGCGCCAAGCATGCCGCGAGGGTCATGGTGAAGGCACAGAGGGGAGGCGTTATCCTCTTCACGACGAGCATTACTTCTGTGATCGGAGGCCAGGCAAAACCGGCTTACAGCGCATCGAAGCACGCCTTGGTGGGGCTGATGAAAGATCTTTGCGTGGAACTTGGGCAGCATGGGATTAGAGCGAATTGCATTGCTCCGGGGGGGATTGCGACGCCAATGCTGAACGGTTGGTTGAAGATGGAGAGGGAGGGGACAGAGGAGATCCTGCAGTCGGTGGGGGTGCTGAAAGGTGGAGTGGTTAAGGAGGAAGACGTGGCAGAGGCGGCGGTTTATTTGAGCAGCGACGAGGGGAGGTTCATAAGTGGAGTTAACCTTGTGGTGGATGGGGGTTATAGCTCAACCAATGGCTCATTCGCTATGATAGCGAACGTTCTCAAAAACATCCAAACCACCAATTGCATTGATGCCTAA 1110 0.5189 MRNTEVIGEKEKPKMIEARASEIRSRSQPRVSLATGEGTEELNLTRLAILSVSRVDSVNGGEKKESVDGEGKARINIILPMAPVAKRLEGKVAIITGGAGAIGATTAKLFLQHGAKVIIADVQDELGISLCKSLITKDGAANNNNNIDYVHCDVTSEQDVKNAVDLAVSKYGHLDIMYNNAGTAGDNIKRPMENSTVEDFKRIFDVNVLGAFLGAKHAARVMVKAQRGGVILFTTSITSVIGGQAKPAYSASKHALVGLMKDLCVELGQHGIRANCIAPGGIATPMLNGWLKMEREGTEEILQSVGVLKGGVVKEEDVAEAAVYLSSDEGRFISGVNLVVDGGYSSTNGSFAMIANVLKNIQTTNCIDA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01806 369 PRINTS Glucose/ribitol dehydrogenase family signature 92 109 IPR002347 -
Adu06g01806 369 PRINTS Glucose/ribitol dehydrogenase family signature 223 239 IPR002347 -
Adu06g01806 369 PRINTS Glucose/ribitol dehydrogenase family signature 249 268 IPR002347 -
Adu06g01806 369 PRINTS Glucose/ribitol dehydrogenase family signature 308 328 IPR002347 -
Adu06g01806 369 PRINTS Glucose/ribitol dehydrogenase family signature 172 183 IPR002347 -
Adu06g01806 369 PRINTS Glucose/ribitol dehydrogenase family signature 270 287 IPR002347 -
Adu06g01806 369 Pfam Enoyl-(Acyl carrier protein) reductase 99 345 - -
Adu06g01806 369 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 236 264 IPR020904 GO:0016491
Adu06g01806 369 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 229 237 IPR002347 -
Adu06g01806 369 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 249 268 IPR002347 -
Adu06g01806 369 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 183 IPR002347 -
Adu06g01806 369 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 81 354 - -
Adu06g01806 369 Gene3D - 81 365 - -
Adu06g01806 369 PANTHER SECOISOLARICIRESINOL DEHYDROGENASE-RELATED 81 354 - -
Adu06g01806 369 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 89 345 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01806 Adu-Chr6 73441093 73444677 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01806 88 343 Acyl Lipid Metabolism Gene Families AT1G63380 28.571 4.03e-23 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01806 - - var:108327580 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01806 06 73441093 73444677 Adu06g01806 06 73441093 73444677 ECH