Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01800 ATGATACTTGCCACACTCTTCTCTCCACTTTCTCTTCTGCTACTCTTATTCTTCTCCTTCTCCACCTTGTCTTTTTCCCATTTCGTACCCACTTTCCCTTCTCCATCCAAGTTTCACCCTGAGCTAACCACCCAACTCTCTCGTTCTTCTTCTTCTTCTTCTTCATCAAATGGACTCTACGAGACAAAGTTCTTCACCCAAACGCTCGATCACTTCGATTACACTCCCCAAAGCAATCACAAGTTTCAACAAAGGTACCTCTTCAATGATACCCATTGGGGTGGCGCCAACAACAATGCTCCAATCTTTGTTTACACCGGAAACGAAGGCAACATAGAGTGGTTCACGCAGAACACGGGGTTCATGTTCGAAACCGCGCCACGTTTCCAAGCACTTTTGGTTTTCATTGAGCATAGATTCTACGGAAAATCAGTGCCATTTGGTGGGAACAGGGAGGTTGCATATGCAAATACGAGTACACTTGGGTACCTGAGTTCTACTCAGGCGTTGGCTGATTATGCCACTCTCATTATTGATCTGAAGAAGAATATCTCAGCAATTGATTCCCCTGTTGTGGTGTTTGGTGGATCCTACGGAGGAATGCTTGCTGCGTGGTTCAGAATGAAGTATCCGCACGTTACGATCGGAGCCTTAGCTTCATCTGCCCCAATCCTTCATTTTCCGGGTTTGGTTTCACCCTATGTCTTCTCCGATACTATCGCCAACGACTTCAGGAGTGAGAGTGAGAACTGTTATAACGTCATAAAAAGTTCTTGGAAACAAATAGAGGATGCGGGAAAGACTGATAAAGGATTGAAGCTGCTGCAGAAATCATTCAGATTATGCAAGAATTATAGCTCAGATGATCTGGAAGGTTGGCTTCAATCGGCGTGGACATATACAGCGATGACAGATTATCCCACACCTTCCAATTTTATGAATCCCTTGCCAGCTTATCCAATCAGAAAGATGTGCGAGGCAATAGAAAAGGAAAAGAAGAGATCAACATTTGAGAAGCTGTACGCAGCAGCGAATATATATTACAACTACAGCGGCTCTGCCACTTGCTTCGACTTGGATGATCATTCTGATCCCCATGATCTCGGGGGATGGCAATGGCAGGCTTGTTCAGAGATGATTATGCCTCTTGGTGTGAGGAAGGAAAGCATGTTCCCTGAATCTGAATGGTCATACAAAAGTAGATCCGATTCCTGCCAATTCTATTACAATACAACTCCTAGACCCCATTGGATCACCACTGAGTTTGGCGGCTATCATATTCACCAAGTTCTGAAAAGATCCGCCAGCAACATTATCTTCTTTAACGGTTTAAGAGACCCTTGGAGTGGTGGAGGGGTATTAAAGAGTATATCAAAAACTTTAGTAGCCATAGTTGCAAAAGAAGGAGCTCATCACGTAGACCTAAGGTACTCAACTAAGGAAGATCCAAAGTGGCTCACACACGTGAGGGAAAAAGAGATAAAGATCATAGCAAGTTGGATCAAGCGATACTACAGAGACCTACAATTATAA 1533 0.4397 MILATLFSPLSLLLLLFFSFSTLSFSHFVPTFPSPSKFHPELTTQLSRSSSSSSSSNGLYETKFFTQTLDHFDYTPQSNHKFQQRYLFNDTHWGGANNNAPIFVYTGNEGNIEWFTQNTGFMFETAPRFQALLVFIEHRFYGKSVPFGGNREVAYANTSTLGYLSSTQALADYATLIIDLKKNISAIDSPVVVFGGSYGGMLAAWFRMKYPHVTIGALASSAPILHFPGLVSPYVFSDTIANDFRSESENCYNVIKSSWKQIEDAGKTDKGLKLLQKSFRLCKNYSSDDLEGWLQSAWTYTAMTDYPTPSNFMNPLPAYPIRKMCEAIEKEKKRSTFEKLYAAANIYYNYSGSATCFDLDDHSDPHDLGGWQWQACSEMIMPLGVRKESMFPESEWSYKSRSDSCQFYYNTTPRPHWITTEFGGYHIHQVLKRSASNIIFFNGLRDPWSGGGVLKSISKTLVAIVAKEGAHHVDLRYSTKEDPKWLTHVREKEIKIIASWIKRYYRDLQL 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01800 510 Pfam Serine carboxypeptidase S28 67 492 IPR008758 GO:0006508|GO:0008236
Adu06g01800 510 Gene3D alpha/beta hydrolase 64 501 IPR029058 -
Adu06g01800 510 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 11 508 - -
Adu06g01800 510 Gene3D Serine carboxypeptidase S28, SKS domain 232 395 IPR042269 -
Adu06g01800 510 SUPERFAMILY alpha/beta-Hydrolases 120 475 IPR029058 -
Adu06g01800 510 PANTHER LYSOSOMAL PRO-X CARBOXYPEPTIDASE-LIKE PROTEIN 11 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01800 Adu-Chr6 72902475 72913467 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01800 K01285 - gmx:100781698 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01800 06 72902475 72913467 Adu06g01800 06 72902475 72913467 ECH