Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01786 ATGCAAGCAGAGGGCGTTCACAGCTACGTTGCAGAGTGGCCAATTTCCTGTCTAGCATGGTCAGTCCGCCGTGATAAAGCCCCGCGCCTGGCCATAGGCAGCTACTTGGAAGACTACACCAACAAAGTCGAACTCATTCACTTCAACTACCACACCTTCAACTTCACCACCGATCCTCGTTTGGTGCTGGACCACCCATACGCCCCAACCAACCTCATGTTCTTCCCCTCCGACAACGACACCAACCCCGACCTCCTCGCCACTTCCGGCGACAACCTCAGACTCTGGCAAATTCACCACGACCACATTCAACTCAAGTCCCTCTTAATTGGTAACAAAGTCAGTGACCACTCTGCAATAACGTCGTTTGACTGGGCAGGGTTTGATCCTCGTCTTGTGGCCACTTCTAGCGTCGACACCACGTGCACCATTTGGGACATTGAAAGGGAATCCATGAATGCGCAGCTTGTGGCGCACGATAAAGAGGTGTATGATATTTCATGGGGTGGGCTTAACGTCTTTGCTTCTGTCTCTGGTGATGGTTCTGTTAGGGTGTTTGATCTGAGAGACAAGGAGAAATCGACCATCATTTATGAGAATCCGGTTCAAGATTGTCCCTTGTTGCGTCTCGAATGGAACAAAGGGGATCCCAGGTTTATGGCGACGGTTGGAATGAACAGCAGTAAGGTGGTGGTTATGGATATTAGGCAACCAACAACGCCTTTTATGGAGTTAAGTAAGCATAGGATGAGTGTTAATGGTGTATCGTGGTCCCCGGATATCGGACGACATTTGTGCTCTGTAGGTGATGATTCAACGGCCTTGATTTGGGAGGTGATGGAAACGGGGGTTCAAGGTGGTTGTGGTGATGTAGAGCCTTTGATGTGCAAAAGCCGGTACAGTGCTACCACGGTTACCAGTCGCCGTCGGACATCGCACCGACACTCTTCTGACTGGCGCCGTCGTCCGCACAGGCCACCGTATGTAGGGAGGACGCGCATATTGTGTGAGTCGAGCTCGCAGCACCGCACTAACCCGGAAGTCCAGCGCTTCCATCGCAGCCACTTTGTGCCTTCTTCCTGTCGCCAGATGTTCACTTTCTCTGTGAACGTGGATGTTTTTGTGGATGTTTATTATTCGAGTAATTCAACAAGACCCAGGCAGCAGCGCTGGGATGATGCGAGCGCGGGGTTTGGGGCTACAACTCACGTCGACAACGTTGACAGTTGCAGGTCACAGATGTTCGGCTGCGTGAGGAGTGACGAAGGTTCTTCCGGCGAGGGTGTTGGCGCGAGGAGGCGGAGCGCGACAGTTCCGATCACCAGGAACGGAGGCTACACGTCGCACAGAAACAGAGCGGTGGACGCAGGTTGCTACGCACACAGCGGAGAAGGGGGGATTTTTCTGCGGAACAAACAATGGGATTTTTTGGAGGGTAGAACGGCGAGTGACGCGAGGGCGGGGTGCGGCGCGATGGAGAATGGCGAAGCGAGGGAGAAAGAGGCAATGCCGAGGCTGAGTAAGGTGGCGTTCTCGAAGAGGCAACGTCGACGCCAAAGAGGGAAGGAGAAGGAGGCACAATGCAGAGAGAGTAATGGGTGGGTGGAAGAAAAATAG 1617 0.5331 MQAEGVHSYVAEWPISCLAWSVRRDKAPRLAIGSYLEDYTNKVELIHFNYHTFNFTTDPRLVLDHPYAPTNLMFFPSDNDTNPDLLATSGDNLRLWQIHHDHIQLKSLLIGNKVSDHSAITSFDWAGFDPRLVATSSVDTTCTIWDIERESMNAQLVAHDKEVYDISWGGLNVFASVSGDGSVRVFDLRDKEKSTIIYENPVQDCPLLRLEWNKGDPRFMATVGMNSSKVVVMDIRQPTTPFMELSKHRMSVNGVSWSPDIGRHLCSVGDDSTALIWEVMETGVQGGCGDVEPLMCKSRYSATTVTSRRRTSHRHSSDWRRRPHRPPYVGRTRILCESSSQHRTNPEVQRFHRSHFVPSSCRQMFTFSVNVDVFVDVYYSSNSTRPRQQRWDDASAGFGATTHVDNVDSCRSQMFGCVRSDEGSSGEGVGARRRSATVPITRNGGYTSHRNRAVDAGCYAHSGEGGIFLRNKQWDFLEGRTASDARAGCGAMENGEAREKEAMPRLSKVAFSKRQRRRQRGKEKEAQCRESNGWVEEK 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01786 538 MobiDBLite consensus disorder prediction 493 538 - -
Adu06g01786 538 ProSiteProfiles Trp-Asp (WD) repeats profile. 245 279 IPR001680 GO:0005515
Adu06g01786 538 ProSitePatterns Trp-Asp (WD) repeats signature. 265 279 IPR019775 -
Adu06g01786 538 SUPERFAMILY WD40 repeat-like 14 281 IPR036322 GO:0005515
Adu06g01786 538 MobiDBLite consensus disorder prediction 493 507 - -
Adu06g01786 538 Pfam WD domain, G-beta repeat 115 146 IPR001680 GO:0005515
Adu06g01786 538 ProSiteProfiles Trp-Asp (WD) repeats profile. 156 196 IPR001680 GO:0005515
Adu06g01786 538 Gene3D - 4 355 IPR015943 GO:0005515
Adu06g01786 538 MobiDBLite consensus disorder prediction 521 538 - -
Adu06g01786 538 MobiDBLite consensus disorder prediction 305 324 - -
Adu06g01786 538 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 245 279 - -
Adu06g01786 538 PANTHER WD REPEAT-CONTAINING PROTEIN LWD1-LIKE 4 298 - -
Adu06g01786 538 PANTHER WD REPEAT CONTAINING PROTEIN 4 298 IPR045159 -
Adu06g01786 538 SMART WD40_4 107 146 IPR001680 GO:0005515
Adu06g01786 538 SMART WD40_4 238 278 IPR001680 GO:0005515
Adu06g01786 538 SMART WD40_4 56 97 IPR001680 GO:0005515
Adu06g01786 538 SMART WD40_4 149 187 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01786 Adu-Chr6 71609742 71614526 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01786 K11805 - rcu:8269731 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01786 06 71609742 71614526 Adu06g01786 06 71609742 71614526 ECH