Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01703 ATGAAAGGTGAGAAAATTGATTATGAAGCAGTTAGCACTGACAAAGATGACAAGGATGGGCAAGGTCATGTTTTGTCATCACATGTGGATGTTGACACCAATACTCAAGCTGAGAATACATCAGTATCTATAAACAAGAAAGTGAAGGTCGAAAGTGAGGAAGCTAGACCAAAGATCATTGCCCCACCTGGCACTGGTCATAAAATATATGAGATTGATCCATCTTTGCAAGCTCACCGTGCTCATCTTGACTTCCGTTATGGACAATATAAGAGATTGCTTGAAGAAATTAACAAGAATGAAGGTGGTCTGGATGCATTTTCTCGTGGTTATGAAAAATTTGGCTTCACCCGCAGTGCTACAGGCATTACTTACAGAGAGTGGGCACCTGGAGCAACGTCAGCAGCATTAATTGGAGATTTCAACAACTGGAATCCAAACGCAGATGTAATGACTCGGATCCGCATGGAAACTCCGTCTGGAATCAAAGATTCAATCCCTGCTTGGATAAAGTTCTCTGTACAGGCTCCTGGTGAAATTCCATATAATGGTATATACTATGATCCACCAGAAGAGGAAAAATATGTCTTCAAATATCCACAGCCAAAGAGACCAAAATCACTTAGAATATATGAATCACATGTTGGAATGAGTAGTCCGGAACCAAAAATCAATACGTATGTCAACTTTAGAGATGAAGTGCTACCTCGCATTAAAAGGCTTGGCTATAATGCTGTCCAGATTATGGCTATTCAAGAGCATTCTTATTATGCTAGCTTTGGGTACCATGTTACAAATTTCTTTGCACCTAGCAGCCGGTTTGGAACTCCGGATGATCTCAAGTCTCTCATAGACAAAGCCCATGAATTAGGCCTGCTTGTTCTGATGGATATTGTACATAGTCATGCATCAAATAATACACTGGATGGGCTGAACATGTTTGATGGAACTGATACTCATTACTTCCATGGTGGGTCACGAGGTTATCATTGGATGTGGGATTCTCGTCTTTTTAACTATGGAAGCTGGGAGGTTCTAAGGTATCTGCTTTCAAATGCAAGATGGTGGCTGGAAGAATATAAGTTTGATGGGTTTCGATTTGATGGTGTCACATCAATGATGTATACTCATCATGGATTGGGGGTTGGTTTTACTGGAAATTACAATGAGTACTTCGGTTTTGCAACTGATGTTGATGCTGTGGTTTACCTGATGCTGGTTAATGATGTCATTCATGGGCTCTTTCCTGAGGCTGTTACTATTGGTGAAGATGTCAGTGGAATGCCAACATTTTGCCTTCCTACACAAGATGGTGGGGTTGGCTTTGACTACCGCCTGCACATGGCCATTGCAGACAAGTGGATTGAGATTCTCAAGAAGAAAGATGAAGACTGGGAAATGGGTGATATAGTTCACACTCTCACAAACAGAAGGTGGCTAGAAAAATGTGTAGCATATGCTGAAAGTCATGACCAAGCTTTGGTTGGGGACAAGACAATTGCATTTTGGTTGATGGACAAGGATATGTATGACTTCATGGCCTTAGATAGACCATCTACTCCTCTCATAGATCGTGGTATAGCACTACACAAGATGATTAGGCTTATCACAATGGGTCTTGGTGGGGAAGGGTATTTGAATTTTATGGGGAATGAATTTGGCCATCCTGAGTGGATTGATTTTCCAAGGGGTGATCAACATCTTCCTACTGGTGCAGTAATTCCCGGGAATAATTACAGTTATGATAAATGTAGGCGTAGATTTGACTTGGGGGATGCAGACTATCTTAGATATAGGGGGATGCAAGAATTTGATCAGGCTATGCAGCATCTGGAAGAAAGGTTTGGTTTCATGACTTCTGAACACCAATATATTTCTCGGAAACATGAGGGTGACAAAGTTATAGTGTTTGAAAGGGGCAAACTTGTATTTGTCTTCAATTTTCATTGGTACAACAGCTATTCAGATTACAGAGTTGGATGTTTAAACCCAGGGAAATACAAG 2004 0.4102 MKGEKIDYEAVSTDKDDKDGQGHVLSSHVDVDTNTQAENTSVSINKKVKVESEEARPKIIAPPGTGHKIYEIDPSLQAHRAHLDFRYGQYKRLLEEINKNEGGLDAFSRGYEKFGFTRSATGITYREWAPGATSAALIGDFNNWNPNADVMTRIRMETPSGIKDSIPAWIKFSVQAPGEIPYNGIYYDPPEEEKYVFKYPQPKRPKSLRIYESHVGMSSPEPKINTYVNFRDEVLPRIKRLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPDDLKSLIDKAHELGLLVLMDIVHSHASNNTLDGLNMFDGTDTHYFHGGSRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLGVGFTGNYNEYFGFATDVDAVVYLMLVNDVIHGLFPEAVTIGEDVSGMPTFCLPTQDGGVGFDYRLHMAIADKWIEILKKKDEDWEMGDIVHTLTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPLIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGDQHLPTGAVIPGNNYSYDKCRRRFDLGDADYLRYRGMQEFDQAMQHLEERFGFMTSEHQYISRKHEGDKVIVFERGKLVFVFNFHWYNSYSDYRVGCLNPGKYK 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01703 668 CDD AmyAc_bac_euk_BE 191 606 - -
Adu06g01703 668 SUPERFAMILY E set domains 107 154 IPR014756 -
Adu06g01703 668 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 153 668 IPR037439 GO:0003844|GO:0005978
Adu06g01703 668 MobiDBLite consensus disorder prediction 1 23 - -
Adu06g01703 668 Pfam Alpha amylase, C-terminal all-beta domain 624 668 IPR006048 GO:0003824|GO:0005975|GO:0043169
Adu06g01703 668 Gene3D Immunoglobulins 152 194 IPR013783 -
Adu06g01703 668 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 2, CHLOROPLASTIC/AMYLOPLASTIC 34 152 - -
Adu06g01703 668 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 113 153 IPR004193 GO:0004553|GO:0005975
Adu06g01703 668 SUPERFAMILY Glycosyl hydrolase domain 620 668 - -
Adu06g01703 668 Gene3D Glycosidases 195 615 - -
Adu06g01703 668 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 2, CHLOROPLASTIC/AMYLOPLASTIC 153 668 - -
Adu06g01703 668 SMART aamy 225 585 IPR006047 GO:0005975
Adu06g01703 668 Pfam Alpha amylase, catalytic domain 235 306 IPR006047 GO:0005975
Adu06g01703 668 PIRSF GlgB 150 668 IPR037439 GO:0003844|GO:0005978
Adu06g01703 668 PIRSF GlgB 9 158 IPR037439 GO:0003844|GO:0005978
Adu06g01703 668 Gene3D - 620 668 IPR013780 -
Adu06g01703 668 SUPERFAMILY (Trans)glycosidases 199 613 IPR017853 -
Adu06g01703 668 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 34 152 IPR037439 GO:0003844|GO:0005978
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01703 Adu-Chr6 63180959 63193081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01703 9 668 Glycoside Hydrolase AT5G03650 77.939 0.0 1132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01703 K00700 - gmx:100785968 1239.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01703 06 63180959 63193081 Adu06g01703 06 63180959 63193081 ECH