Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01544 ATGGCCCCTTCAAGCAATGCTGAGTGGCCACCTTCACCTGGCTACTGGCCAAGTTCCAAATTCAAGACGATGAACTTTTACAAAGGTTTTAGGAACCTTTGGGGCCCCCAGCACCAAAGAATAGAACAAAATGCATTAACAATTTGGCTTGATAGAACCTCAGGAAGTGGCTTCAAGTCTGTTGCTCCGTTTCGATCCGGATACTTTGGTGCTTCCATTAAGCTCCAACCTGGCTACACTGCTGGAGTTATAACAGCTTTCTATCTTTCCAACAATGAAGCTCATCCTGGATTCCATGATGAAGTAGACATTGAGTTTCTTGGGACTACGTTTGGAAAGCCTTACACTTTGCAGACCAATGTTTATATCAGAGGAAGTGGAGATGGTCAAATTATAGGCAGAGAGATGAAGTTCCATTTATGGTTTGATCCAACCAAAGATTTTCATCACTATGCTATTCTCTGGAGTCCTAAGGAAATAATATTCTTTGTGGATGATGTGCCAATAAGGAGGTACCCGAGGAAAAGTGCAGAGACATTTCCAATGAGGCCAATGTGGCTTTATGGTTCAATATGGGATGCATCATCATGGGCAACCGAGGATGGCAAGTACAAAGCTGATTATAGGTACCAACCCTTTGTGGCAAGGTACACAAACTTCAAGGCCAGTGGTTGCACGGCGTATGCGCCGCGCTGGTGCCACGCCGTCTCAGCCTCGCCCTATAGGTCCGGCGAGTTGAGTAGGCAGCAATATAGTGCCATGAGATGGGTGCAAATGTACCACATGGTTTACAACTATTGTCAAGACTCCAAAAGGGATCATAGGCTAACACCTGAGTGTTGGAGTTAA 849 0.4535 MAPSSNAEWPPSPGYWPSSKFKTMNFYKGFRNLWGPQHQRIEQNALTIWLDRTSGSGFKSVAPFRSGYFGASIKLQPGYTAGVITAFYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGQIIGREMKFHLWFDPTKDFHHYAILWSPKEIIFFVDDVPIRRYPRKSAETFPMRPMWLYGSIWDASSWATEDGKYKADYRYQPFVARYTNFKASGCTAYAPRWCHAVSASPYRSGELSRQQYSAMRWVQMYHMVYNYCQDSKRDHRLTPECWS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01544 282 Gene3D - 6 280 - -
Adu06g01544 282 Pfam Glycosyl hydrolases family 16 28 209 IPR000757 GO:0004553|GO:0005975
Adu06g01544 282 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 1 281 IPR044791 GO:0004553
Adu06g01544 282 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 242 280 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Adu06g01544 282 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 1 281 - -
Adu06g01544 282 PIRSF EndGlu_transf 13 282 IPR016455 GO:0010411|GO:0016762|GO:0042546
Adu06g01544 282 SUPERFAMILY Concanavalin A-like lectins/glucanases 48 268 IPR013320 -
Adu06g01544 282 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 5 217 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01544 Adu-Chr6 37761602 37764492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01544 1 280 Glycoside Hydrolase AT3G44990 66.904 5.38e-140 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01544 K08235 - gmx:100796698 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01544 06 37761602 37764492 Adu06g01544 06 37761602 37764492 ECH