Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01528 ATGCCTGCAACTCCATTTTCGTGCTCGTACCTCATCCTTCAGCCACGCTTCAACTCCTACTTCAACCCTCTCTTCCGTTCCTTCACCTACCAGCTCTCTACTTCACCGCTCTCCTTCAATGGAATCAAGTTCACCGCCGCCAGAGTCCACTCTTCACTCTCGCCGGCGGCGGAGACCGACTCTCAGAGCGGCGGTGGCGGAAGATCTGGAGCTTTATCTCCCGGTCCTATAGTCGCTGGAGAGGTGCAGAGGATCGACGTGAACCCTCCCAAGGGGACGCGTGATTTCCCGCCTGAGGAAATGCGCTTGCGCAACTGGCTCTTCAACAATTTCAAAGAGGTTTCGCGTTTATATGGATTTGAGGAGGTTGATTTTCCTGTGCTTGAGAATGAGGCATTGTTCACTAGGAAAGCAGGGGAGGAGATTAAGGACCAGCTTTATTGTTTCGAAGACCGGGGTAATCGTCGTGTTGCACTGAGGCCAGAACTTACTCCTTCTTTGGCAAGGCTGGTGATACAGAAAGGCAAGTCTGTACCACTGCCATTGAAGTGGTTCACTGTTGGACAATGTTGGCGGTATGAGAGAATGACAAGGGGGCGCCGTCCAGAGCTTATATCGTCTATCGTCACTTTATTCAAGCGAATAGGAATTAAAGAATCCGATGTTGGGTTTAAAGTTTCCAGCCGAAAGGTTCTACAGGAAGTATTGAAGTGTTATTCCATACCTGAAAGTTTATTTGGCAAGGTCTGCGTCATTATTGACAAAATCGAGAAAATTCCAGTTGATGAGGTAAAGAAAGAGTTGATGGCTGCTGGTGTATCACAAGAGGCTGTCGAGGAGCTTTTGCAAGTCCTTTCTGTAAAGTCATTGACAGGGTTAGAAGAGAAGCTTGGAAGCAGTGGGAAAGCAATTGCTGACCTGAAACAGTTGTTTTCACTTGCTGAAAAATTTGGTTACTCTGAATGGATTCAATTTGATGCATCAGTTGTTCGAGGCCTTGCTTACTACACTGGCATTGTATTCGAGGGTTTTGATCGAGAAGGAAAGCTGCGAGCTATTTGCGGTGGTGGTCGTTATGATCATTTGTTCTCAACTTTTGGTGCTGATGACATTCCTGCCTGTGGTTTTGGATTTGGTGATGCAGTTGTAGTGGAATTACTTAGAGAAAAGGGTCTGCTACCAGATCTCAGCTTACAAATGGATTACATTGTATGTGCCTTGGATGAAGATCTTCAAGGTGCTGCTGCTATGGTTGCTCATGTTCTCAGAAAAAAGGGACAGAGTGTTGACTTAGTTTTGGAAAGCAAACCTCTTAAGTGGGTTTTTAAGCGAGCTGCCCGAAATAATGCTCAGCGGCTTGTATTAGTGGGGAGCTCTGAGTGGCAAAGGGGTGTGGTTGGTGTCAAAATTCTTGCTACTGGTGAACAGTACGAGGTTAAGCTGGATGAACTGATATAA 1458 0.465 MPATPFSCSYLILQPRFNSYFNPLFRSFTYQLSTSPLSFNGIKFTAARVHSSLSPAAETDSQSGGGGRSGALSPGPIVAGEVQRIDVNPPKGTRDFPPEEMRLRNWLFNNFKEVSRLYGFEEVDFPVLENEALFTRKAGEEIKDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVPLPLKWFTVGQCWRYERMTRGRRPELISSIVTLFKRIGIKESDVGFKVSSRKVLQEVLKCYSIPESLFGKVCVIIDKIEKIPVDEVKKELMAAGVSQEAVEELLQVLSVKSLTGLEEKLGSSGKAIADLKQLFSLAEKFGYSEWIQFDASVVRGLAYYTGIVFEGFDREGKLRAICGGGRYDHLFSTFGADDIPACGFGFGDAVVVELLREKGLLPDLSLQMDYIVCALDEDLQGAAAMVAHVLRKKGQSVDLVLESKPLKWVFKRAARNNAQRLVLVGSSEWQRGVVGVKILATGEQYEVKLDELI 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01528 485 CDD HisRS-like_core 100 387 IPR041715 -
Adu06g01528 485 PANTHER HISTIDYL-TRNA SYNTHETASE 83 484 IPR004516 GO:0005737
Adu06g01528 485 MobiDBLite consensus disorder prediction 55 75 - -
Adu06g01528 485 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 92 201 IPR006195 -
Adu06g01528 485 PANTHER HISTIDINE--TRNA LIGASE, MITOCHONDRIAL-RELATED 83 484 - -
Adu06g01528 485 Gene3D - 393 485 IPR036621 -
Adu06g01528 485 Gene3D Bira Bifunctional Protein; Domain 2 83 391 IPR045864 -
Adu06g01528 485 Pfam Histidyl-tRNA synthetase 203 377 IPR041715 -
Adu06g01528 485 Pfam Histidyl-tRNA synthetase 92 199 IPR041715 -
Adu06g01528 485 SUPERFAMILY Class II aaRS and biotin synthetases 89 389 IPR045864 -
Adu06g01528 485 SUPERFAMILY Class II aaRS ABD-related 400 485 - -
Adu06g01528 485 Pfam Anticodon binding domain 404 485 IPR004154 -
Adu06g01528 485 PIRSF His-tRNA_synth 201 485 IPR004516 GO:0005737
Adu06g01528 485 PIRSF His-tRNA_synth 83 203 IPR004516 GO:0005737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01528 K01892 - gmx:100793186 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01528 06 35811529 35817692 Adu06g01528 06 35811529 35817692 ECH