Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01365 ATGGACCGCTACCCCTACTCCGAGCCCACCACCCCTGCCTCTTCCGTCCCGAGGGAAACCCTCTTTGTCTCCAACTCCAGCAACTCCCTCGTCTTCTCCAACTCCGGCAAGTCCCTCGTCGTCTCCGCCTCCGGCTCGCGCTTCGATCCGAGGAAGAAGTATGTTAGGCAGGTAACCGGCCGGCACAATGACACCGAGCTCCACCTCGCTGCCCAGCGCGGCGATGTTACTGCCGTTCGACGAATCCTTGCCGAGATCGATGATCAGATGACGGGAACCCTAAGCGGAGCTGAGTTTGATGCTGAGGTGGTGGAGATTAGGTCCGCGATCGTCAACGAAGTCAACGAATTGGGAGAGACGCCGCTGTTCACGGCCGCCGATAAGGGACACCTGGATGTCGTTAAAGAGCTTCTCCCTCACACCACCAAAGAGGCCCTTTCGTTCAAGAACCGTGCCGGCTTCTCTCCCTTGCACATTGCCGCTAAACAAGGTCATAAAGACATTGTAGAGGTGCTTCTAGACCATGATCCGGAGCTAAGCAAGACCTTTGGCCAATCAAATGCAACCCCTCTTGTCACTGCAGCTATGAAGGATCAAGCGGATGTTGTTGAGCTGTTGCTTAACAGAGATCCTAGCTTGTTGGAGATAGCTAAGTCCAATGGGAAGAACGCACTCCATTTATCTGGTCGGCAAGGGCACGTTGCTGTGGTGAAACTGTTGCTGGCCCATGATCCGCAACTCGCTCGGAGGACCGATAAGAAAGGACAAACTGCTTTGCACATGGCTGTGAAGGGGACTAGCTGTGAAGTGGTGAAGATGATTCTTAATGCAGATCCTGCAATAGTCATGTTGCCTAACAAGTTTGGAAACAATGCATTGCATATAGCCACCAGGAAGAAAAGGGTAGAGATAGTGAATGAACTGTTACTTCATCCTGACACCAATGTGAATGCCCTATCAAGAGACCAGAAAACAGCTCTTGACATTGCTGAAGGACTTCCAGTGTCCGAAGAATCCTGGGAGATAAAAGACTGCCTTGTCCGTTTTGGTGCATGTAAATCCAGTGACCTCAAGCAACCAAGGGACGAGCTGAGGAGCTGCAGAAGTTGCACCAAAGCGGAATCCATAATGCCACAAATTCAGTAA 1146 0.5175 MDRYPYSEPTTPASSVPRETLFVSNSSNSLVFSNSGKSLVVSASGSRFDPRKKYVRQVTGRHNDTELHLAAQRGDVTAVRRILAEIDDQMTGTLSGAEFDAEVVEIRSAIVNEVNELGETPLFTAADKGHLDVVKELLPHTTKEALSFKNRAGFSPLHIAAKQGHKDIVEVLLDHDPELSKTFGQSNATPLVTAAMKDQADVVELLLNRDPSLLEIAKSNGKNALHLSGRQGHVAVVKLLLAHDPQLARRTDKKGQTALHMAVKGTSCEVVKMILNADPAIVMLPNKFGNNALHIATRKKRVEIVNELLLHPDTNVNALSRDQKTALDIAEGLPVSEESWEIKDCLVRFGACKSSDLKQPRDELRSCRSCTKAESIMPQIQ 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01365 381 ProSiteProfiles Ankyrin repeat profile. 117 138 IPR002110 GO:0005515
Adu06g01365 381 Pfam Ankyrin repeats (3 copies) 252 317 IPR002110 GO:0005515
Adu06g01365 381 Pfam Ankyrin repeats (3 copies) 67 178 IPR002110 GO:0005515
Adu06g01365 381 Pfam Ankyrin repeats (3 copies) 186 244 IPR002110 GO:0005515
Adu06g01365 381 Gene3D - 37 178 IPR036770 -
Adu06g01365 381 PANTHER CASKIN 32 367 - -
Adu06g01365 381 ProSiteProfiles Ankyrin repeat profile. 288 321 IPR002110 GO:0005515
Adu06g01365 381 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN ITN1 32 367 - -
Adu06g01365 381 Gene3D - 179 347 IPR036770 -
Adu06g01365 381 ProSiteProfiles Ankyrin repeat profile. 152 180 IPR002110 GO:0005515
Adu06g01365 381 ProSiteProfiles Ankyrin repeat region circular profile. 220 241 - -
Adu06g01365 381 SUPERFAMILY Ankyrin repeat 67 333 IPR036770 -
Adu06g01365 381 ProSiteProfiles Ankyrin repeat region circular profile. 117 138 - -
Adu06g01365 381 SMART ANK_2a 254 283 IPR002110 GO:0005515
Adu06g01365 381 SMART ANK_2a 220 249 IPR002110 GO:0005515
Adu06g01365 381 SMART ANK_2a 152 181 IPR002110 GO:0005515
Adu06g01365 381 SMART ANK_2a 288 318 IPR002110 GO:0005515
Adu06g01365 381 SMART ANK_2a 117 145 IPR002110 GO:0005515
Adu06g01365 381 SMART ANK_2a 62 91 IPR002110 GO:0005515
Adu06g01365 381 SMART ANK_2a 186 215 IPR002110 GO:0005515
Adu06g01365 381 ProSiteProfiles Ankyrin repeat profile. 220 252 IPR002110 GO:0005515
Adu06g01365 381 ProSiteProfiles Ankyrin repeat region circular profile. 152 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01365 Adu-Chr6 19945897 19949350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01365 1 365 Miscellaneous Gene Families AT3G09550 65.160 3.89e-174 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01365 - - qsu:112025481 507.679