Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01192 ATGGCGACGCCTCAGAAGGAGCAGAAGCCATGGAAAGCGGAGTATGCCAAGTCAGGGAGATCATCATGCAGGACGTGTAAGGCTCCCATCGACAAGGAGCAATTCCGCCTCGGCAAGATGGTCCAATCCACCAAGTTCGACGGCATCATGGCGATGTGGAACCATGCGGATTGCATATTGAGGAAATCCAACCAGATAAAATTAGTTGATGATGTTGAAGACCTAGAGACTCTTCGCTGGGAAGATCAGCAGAAGGTCAGAAGATATGTAGAAGGTGGTGCATCAACAACAACGAAGTCAAAATCTGTCAAGGATACCGAGTGTGGTATTGAAGTTTCACAGAATGCTCGTGCTACATGCAAACATTGTAGTAAAAAGATCACCAAAGGAGAGGTTCGGATATCTATCAAGCCTGATGGAGGGGGTGCTAAAGGTTTGGCTTGGCATCATGCCAAGTGTTTCATAGAATCATCACCATCGATTCAAGTGGATAAGTTGTCGGGATGGAATAATCTTCCACCTTCTGAACAATCAGCTGTCAGTGCCTTGGCAGGCGATAGTGGTCCAAAAGTTGAGTCCGAAGAGACTAAAGAATCCATAAGACAAACCAATTCAAAAGGTGGCACAAAACGTGGGAAGGATGCTGCGGGTGGGCAGAAGTCAAAAGTTGCCAAGGTAAAGGGAGACGAGTCTGCTAGCAGCGTGGCGTCAATGAAAAATTCTAGTGATTTGGATAAGGTAAATGATCTAGAGAATAGATTGGAGGCACAAAGCAAAGAACTCTGGGCTCTAAAGGATGATCTTAAAAAGCACGTGACAACACCAGAGTTGCGTGAAATGCTGGAAGCCAATAATCAAGATTCAACTGGATCAGAACTTGATTTACGTGATCGCTGTGCTGATGGAATGATGTTTGGAGCACTTGGTAGCTGCCCAACATGCTCTGGCAATCTGCACTATTCTGGAGGAATGTACCGGTGCAGTGGATACATTTCTGAGTGGAGTAAATGTTCGTACTCTACCTGTGAATCAAAACGTCTTGAAGGGAAGTGGAAAATCCCAGAGGAAACAGACAACCAGTACCTTAAAAAGTGGTTCAAATCTCAAAAAGGGAAGAAACCAGTTAGGATATTGCCTGCACCGTCAGCAAGGGAAAGTCAAGCTGTTGCTTCTCAGAATCAATCTTCAAATGGTGGAAGTTTGGGAGATTTGAAAGTTGCCATGTGTGGATTTCCTAAAGAAACTATTGCGGAATGGAAATGCAAAATTGAAGGCTTTGGTGGGGAGCTTCATGCAAAAGTAAAGAAAGAAACTACCTGCTTGGTTGTTAGCGGATTGCTCAATGATGAAGTTGAGATGAGGAAGGCCAGGAGGATGAAAATACCAATAGTAAGAGAGGACTATTTGGTTGATTCTATTGAGAAAAAGAAGAAGCTTCCCTTTGATATGTACAAAGTTGAAATGATTGGGGAGTCTTCTAGCATTGTCACAATTAAAGTGAAGGGGCAAAGTGCTGTCCATGAGGCTTCTGGCCTACAGGATTCTGGCCACATACTTGAGGAAAGAGAAATCATTTATAACACAACTTTGAACAAGTCTGATTTATCTACTGGTGTTAACAGCTACTATATTCTCCAAATCATTGAAGAAGACAATGGTTCAGCATGCTATGTGTTTCGTAAATGGGGCCGAGTGGGAAATGACAAGATTGGAGGAACCAAACTGGATGAAATGTTGAAATCAGATGCAATCAAGGAATTCAAACGATTATTTTATGATAAGACTGGAAATACTTGGGAGGCTTGGGAGCAAAAGACTATTCAGAAGCAACCTGGAAAGTTCTTCCCATTGGATATTGATTATGGAGTTAACAAACAGGTTTCAAAGAAAAACAGAAATGACGAGGACAGCAAACTACCACCTGCATTAAAAGAATTGATGAAAATGCTCTTCAACGTGGAAACATACAGAGCTGCCATGATGGAATTTGATATTAATATGTCCGAAATGCCACTTGGGAAACTGAGCAAAAGTAATATTCAAAAAGGGTTTGAAGCATTAACAGATATACAGAATCTCCTAGAAACTAAGAATTCTGACCCATCAGCCCGGGAAAGCTTGCTTATTGATGCCAGCAATCGGTTCTTTACTTTGATCCCATCTATTCATCCACATATTATTAGGGATGACGATGATTTTAAGTCAAAGGTGAAAATGTTAGAAGCTCTTCAAGACATTGAAATAGCTTCTAGATTAGTTGGATTTGATGCTAACAGTGATGACTCCATTGATGATAATTATAAGAAGCTCCAGTGTGTCATGTCTCCTCTACCTCATGATAGTGAAGATTATCGATTGATTGAGAAATATCTCTATACTACTCATGCTCCCACACATACGGAATGGAGTCTTGAGTTAGAAGAAGTTTTTTCACTTGAAAGGCAAGGAGAGCTTGATAAGTATGCTCCCTATAGGGAGAAACTTGATAACAAAATGCTACTATGGCACGGTTCCAGGGTGACAAATTTTGTGGGTATTCTTAGTCAAGGACTTAGAATCGCACCTCCGGAGGCTCCGGTGACTGGCTACATGTTTGGCAAAGGTATTTACTTTGCTGACTTGGTCAGTAAGAGTGCTCAGTATTGTTTCACTGAAAAGAAAAATCCTGTTGGTCTAATGCTTTTGAGTGAAGTTGCCCTTGGAAATGTCTATGAGCTCAAGAAAGCTAAGTACATGGATAAGCCTCCCGAAGGAAAGCACTCTACTAAAGGCCTTGGCAAGAAAGTGCCTAATGAATCAGAACATGTTAAGTGGAGGGGCGATGTCACCGTTCCCTGTGGCAAGCCTGTGCCATCAAATGTTAAGACTTCTGAGCTCATGTACAATGAGTATATTGTGTATAACACTTCTCAAGTTAAGTTGCAATACTTGTTGAAGGTGAGGTTCCATCACAAGAGATGA 2961 0.4184 MATPQKEQKPWKAEYAKSGRSSCRTCKAPIDKEQFRLGKMVQSTKFDGIMAMWNHADCILRKSNQIKLVDDVEDLETLRWEDQQKVRRYVEGGASTTTKSKSVKDTECGIEVSQNARATCKHCSKKITKGEVRISIKPDGGGAKGLAWHHAKCFIESSPSIQVDKLSGWNNLPPSEQSAVSALAGDSGPKVESEETKESIRQTNSKGGTKRGKDAAGGQKSKVAKVKGDESASSVASMKNSSDLDKVNDLENRLEAQSKELWALKDDLKKHVTTPELREMLEANNQDSTGSELDLRDRCADGMMFGALGSCPTCSGNLHYSGGMYRCSGYISEWSKCSYSTCESKRLEGKWKIPEETDNQYLKKWFKSQKGKKPVRILPAPSARESQAVASQNQSSNGGSLGDLKVAMCGFPKETIAEWKCKIEGFGGELHAKVKKETTCLVVSGLLNDEVEMRKARRMKIPIVREDYLVDSIEKKKKLPFDMYKVEMIGESSSIVTIKVKGQSAVHEASGLQDSGHILEEREIIYNTTLNKSDLSTGVNSYYILQIIEEDNGSACYVFRKWGRVGNDKIGGTKLDEMLKSDAIKEFKRLFYDKTGNTWEAWEQKTIQKQPGKFFPLDIDYGVNKQVSKKNRNDEDSKLPPALKELMKMLFNVETYRAAMMEFDINMSEMPLGKLSKSNIQKGFEALTDIQNLLETKNSDPSARESLLIDASNRFFTLIPSIHPHIIRDDDDFKSKVKMLEALQDIEIASRLVGFDANSDDSIDDNYKKLQCVMSPLPHDSEDYRLIEKYLYTTHAPTHTEWSLELEEVFSLERQGELDKYAPYREKLDNKMLLWHGSRVTNFVGILSQGLRIAPPEAPVTGYMFGKGIYFADLVSKSAQYCFTEKKNPVGLMLLSEVALGNVYELKKAKYMDKPPEGKHSTKGLGKKVPNESEHVKWRGDVTVPCGKPVPSNVKTSELMYNEYIVYNTSQVKLQYLLKVRFHHKR 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01192 986 SMART WGR_cls 526 609 IPR008893 -
Adu06g01192 986 Gene3D - 307 367 IPR038650 -
Adu06g01192 986 Gene3D - 2 105 IPR036957 GO:0003677|GO:0008270
Adu06g01192 986 SUPERFAMILY WGR domain-like 493 619 IPR036930 -
Adu06g01192 986 PANTHER POLY [ADP-RIBOSE] POLYMERASE 1 52 980 - -
Adu06g01192 986 Gene3D - 771 986 - -
Adu06g01192 986 SUPERFAMILY BRCT domain 400 486 IPR036420 -
Adu06g01192 986 Pfam Poly(ADP-ribose) polymerase catalytic domain 781 982 IPR012317 GO:0003950
Adu06g01192 986 PIRSF NAD_ADPRT 4 986 IPR008288 GO:0003677|GO:0003950|GO:0005634|GO:0008270|GO:0051287
Adu06g01192 986 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 14 90 IPR001510 GO:0003677|GO:0008270
Adu06g01192 986 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 111 181 IPR001510 GO:0003677|GO:0008270
Adu06g01192 986 CDD parp_like 637 981 - -
Adu06g01192 986 SMART zf_PARP_3 111 185 IPR001510 GO:0003677|GO:0008270
Adu06g01192 986 SMART zf_PARP_3 14 91 IPR001510 GO:0003677|GO:0008270
Adu06g01192 986 Gene3D - 233 306 - -
Adu06g01192 986 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 108 186 - -
Adu06g01192 986 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 637 770 IPR036616 GO:0003950
Adu06g01192 986 Pfam Poly(ADP-ribose) polymerase, regulatory domain 637 767 IPR004102 GO:0003950
Adu06g01192 986 MobiDBLite consensus disorder prediction 213 227 - -
Adu06g01192 986 Coils Coil 240 267 - -
Adu06g01192 986 Gene3D - 626 770 IPR036616 GO:0003950
Adu06g01192 986 Gene3D - 106 183 IPR036957 GO:0003677|GO:0008270
Adu06g01192 986 MobiDBLite consensus disorder prediction 1 20 - -
Adu06g01192 986 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 11 94 IPR001510 GO:0003677|GO:0008270
Adu06g01192 986 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 8 99 - -
Adu06g01192 986 ProSiteProfiles WGR domain profile. 515 614 IPR008893 -
Adu06g01192 986 MobiDBLite consensus disorder prediction 177 241 - -
Adu06g01192 986 ProSiteProfiles PARP catalytic domain profile. 761 986 IPR012317 GO:0003950
Adu06g01192 986 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 108 180 IPR001510 GO:0003677|GO:0008270
Adu06g01192 986 ProSiteProfiles PARP alpha-helical domain profile. 636 754 IPR004102 GO:0003950
Adu06g01192 986 SMART PADR1_2 295 348 IPR012982 -
Adu06g01192 986 CDD WGR_PARP1_like 516 621 - -
Adu06g01192 986 Pfam WGR domain 526 604 IPR008893 -
Adu06g01192 986 PANTHER DNA LIGASE 52 980 - -
Adu06g01192 986 Gene3D BRCT domain 391 493 IPR036420 -
Adu06g01192 986 SUPERFAMILY ADP-ribosylation 770 985 - -
Adu06g01192 986 Pfam PADR1 (NUC008) domain 297 346 IPR012982 -
Adu06g01192 986 ProSiteProfiles BRCT domain profile. 423 486 IPR001357 -
Adu06g01192 986 SMART BRCT_7 399 476 IPR001357 -
Adu06g01192 986 Pfam BRCA1 C Terminus (BRCT) domain 404 473 IPR001357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01192 Adu-Chr6 15896114 15903816 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01192 K24070 - gmx:100800968 1592.4