Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01173 ATGGCATCCATCTTTGCTAGCACCACAACTCCATCGATCACCCGCGTAGGTCTCTTGCCCAAGCGGGCTCTCGGGGTTTCATCCTCAACCGTTCTTGGGTTGCCAGCAATGGGGAAGGTGGGAAGAGTGAGGTGCTCCATGGAGGAGGGAAAGGCTTGTTCACATGATAGCAACTCGAAGATGGGGATGGGGATGGGGGCATCCTTGATGGCAGCTGCTATGGCTGCAAGCATGTCGAGCCCAGCCATGGCTCTTGTGGATGAGAGGCTGAGCACCGAAGGAACAGGGCTTCCATTTGGTCTGAGCAACAACCTCCTTGGTTGGATCCTGTTTGGTGTGTTCGGTCTCATATGGGCTCTCTACTTTGTCTACACCTCTGATCTTGAAGAGGACGAAGAGTCCGGATTGTCTCTCTAA 417 0.5396 MASIFASTTTPSITRVGLLPKRALGVSSSTVLGLPAMGKVGRVRCSMEEGKACSHDSNSKMGMGMGASLMAAAMAASMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYTSDLEEDEESGLSL 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01173 138 PANTHER PHOTOSYSTEM II REACTION CENTER W 1 138 - -
Adu06g01173 138 Pfam Photosystem II reaction centre W protein (PsbW) 1 138 IPR009806 GO:0009507|GO:0009523|GO:0015979
Adu06g01173 138 PANTHER PHOTOSYSTEM II REACTION CENTER W PROTEIN, CHLOROPLASTIC 1 138 IPR009806 GO:0009507|GO:0009523|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01173 Adu-Chr6 15605626 15606679 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01173 K02721 - gmx:100305788 158.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01173 06 15605626 15606679 Adu02g00735 02 10943591 10944541 PCT