Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01171 ATGGCCACCACTTCAATCTCAAACATGGTGGTTACCTTGGAAGCCAAGAATCCCCCTAAACTACAAGCAGCACCAGCAGCATCTTCATCATCTCACACCCTGGTCACCACCACAAGAAAACCCAGCATCATGACATGCAAAGCCGCCATAAGCACCCAACTCAAACCAGAGCGACCAATGCCCCCGAAACAAGAACAACTGGACATATCATCCGTATGGCGAAAGCTCCACGGGGAGGACAAGTGGGCCGGGCTTCTTGACCCGTTGGACCCTGGCTTGCGGCTTGAGATAATCCGGTACGGCGAAATGGCACAGGCCACGTATGATTCCTTCGACTACGACCCATACTCCAAGTATTGTGGAAGCTGCAGGTACCCACATGAGAAGCTGTTCCAGTACCTTGACATGACGCACATGGGCTACACCGTTTCACGCTACATCTACGCGACGGCCAACGTCAGCCTGCCCAGCTTCTTCAAGAGGTCCAGGTTCCCTCACAAGATGTGGAGCGACAGGGCCAACTGGGCCGGCTACATCGCCGTTTCCGACGACCAAACCAGCAAGAGCTTGGGGAGGAGGGACATAGCCATTGCGTGGAGGGGGACGGTCACGCACACCGAGTGGCTGGCGGATCTCACGAACTACCTCAGGCCTTTATCTCCGGAGATTCCTTGCGGCGATCAAGGGGTGAAGGTGGAGGCGGGCTTCATGGATCTTTACACTGATAAGTCCCCGCAGTGCCGTTTCTGCAAATACTCTGCCAGACACCAGGTCCTTTCGGAGGTGAGGAAGTTGGTTGAGAAGTACGAAGACGAGGAAGTGTCGATCACCATCACCGGCCACAGCTTGGGCAGCGCGTTGGCCGTACTGAGCGCCTTTGACTTGGCAGAAACTGGCTTAAACGTCAAGAAAGACGGCAGCGGCATCCACATCTCCGTGATCACGTTCGCCGGGCCGAGGGTGGGAAACTGGAGGTTCAAGCAGAGGCTGGAGTTGGATCACGGCGTGAAGGTGCTTCGGGTTGTGAACACTCACGACATTGTTCCGAAGTCGCCGGGATTCATCATCAACGAGAGCTCGCCGGAGTGGGTGTACAGACTGTTCAAGTGGTTGCCTTGGAGCTACGCTCACGTTGGGGTGCAGCTGGAGTTGAACCACCGGGACTCACCTGAGTTGAACCCTAATGGTGATGCTTCTTGTGCTCATAACTTGGAGGCTTATTTGCATCTCATTGATGGGTTAGTAATTTACTTCATTCTTAATTGCTTTAATTACTTTTGTTAA 1284 0.5397 MATTSISNMVVTLEAKNPPKLQAAPAASSSSHTLVTTTRKPSIMTCKAAISTQLKPERPMPPKQEQLDISSVWRKLHGEDKWAGLLDPLDPGLRLEIIRYGEMAQATYDSFDYDPYSKYCGSCRYPHEKLFQYLDMTHMGYTVSRYIYATANVSLPSFFKRSRFPHKMWSDRANWAGYIAVSDDQTSKSLGRRDIAIAWRGTVTHTEWLADLTNYLRPLSPEIPCGDQGVKVEAGFMDLYTDKSPQCRFCKYSARHQVLSEVRKLVEKYEDEEVSITITGHSLGSALAVLSAFDLAETGLNVKKDGSGIHISVITFAGPRVGNWRFKQRLELDHGVKVLRVVNTHDIVPKSPGFIINESSPEWVYRLFKWLPWSYAHVGVQLELNHRDSPELNPNGDASCAHNLEAYLHLIDGLVIYFILNCFNYFC 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01171 427 Pfam Lipase (class 3) 197 354 IPR002921 GO:0006629
Adu06g01171 427 Gene3D alpha/beta hydrolase 72 417 IPR029058 -
Adu06g01171 427 PANTHER PHOSPHOLIPASE A1 4 414 - -
Adu06g01171 427 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 4 414 - -
Adu06g01171 427 SUPERFAMILY alpha/beta-Hydrolases 155 414 IPR029058 -
Adu06g01171 427 CDD Lipase_3 146 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01171 Adu-Chr6 15596542 15599561 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01171 25 420 Acyl Lipid Metabolism Gene Families AT1G06800 54.187 4.41e-153 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01171 - - gmx:100815007 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01171 06 15596542 15599561 Adu02g00734 02 10912509 10919365 PCT