Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01149 ATGCCTTTTACAATGAAGATTCAGCCGATTGATTCTGACGTTTGTGAAGAGACGAGGAGGCTGGAGTTGGTGAAGCCGGTGGCCAAGTGGCGGTTGAAGCGGCTCTTCGAGCGCCAGTTCCCCAGCGTTCTGAGGAGCTCGGCGGCGGCGGTGGAGAAGACCGCCGGCGACGATGCGCATTTCGGCAAGGACGTAGCTGGTGCCGATTTGGAACCGAACTCTGTGTGTCTGGCGAGAATGGTGCAGAGTTTCATGGAAGATAATCACGATAATAAGCACCCGGTTTCCGTTAAGTGTTCCCGTAACCGCTGTAACTGCTTCAACGGCAACTGCGACGACAACTCCGACGGTGAATCGGACGCCGGTTTCGGAGAAACTAACCAGCCTTCCTCCAGCGAAGCTCTCGAAATCCTCAAGGGTTTGGTGGCGTGTGGCAGCAAGAGCGAGAGGAATCTGTTAGCGGACACAGCGAAGATAGTTGAGAAGAACAAGATAATCTGCAAACGCAAAGACGGCGATTGCAGAAAGCTCGTCACGGAGGCTTTGTTAGCTCTTGGCTACGATGCTGCAATCTGCAAATCTCGCTGGGAGAAAACTCCTTTCTATCCCGCTGGGGAATACGAGTACATTGACGTGATAATTGGGAACGAGAGGGTGCTGGTTGACGTTGATTTCAGATCGGAGTTCGAGATTGCTCGCCCGACCAAGGCGTACAAGGCGATCCTTCAAACTGTTCCGTACATATTCGTTGGCAAGTGTGAGCGGTTGCAGAGTATGGTGGCGATTGTGTCCGAGGCGGCGAAGCAGAGCTTGAAGAAGAAGGGAATGCCGGTTCCGCCGTGGAGGAAGGTCGAATACGTCAGAGCGAAATGGCTCTCCCCTCACACGCGAGTTTTTCCCCCTTCCTCGTCGCAAGGGATCAAAAACAACGCGGAGGAAAACCAGGTTTTGGCCGGCGGCGCCGGCGAGTTTAAAGTGAGTCGTTGCGAGTCGGATGAGTCTAATATTGTGATCCAATCCAAACCACCGGAGATAAAGGCTAAGAGCTCGCTCTCTGCTTTGGCTGCTGTGTTAAATGAAACCCCATAA 1089 0.5326 MPFTMKIQPIDSDVCEETRRLELVKPVAKWRLKRLFERQFPSVLRSSAAAVEKTAGDDAHFGKDVAGADLEPNSVCLARMVQSFMEDNHDNKHPVSVKCSRNRCNCFNGNCDDNSDGESDAGFGETNQPSSSEALEILKGLVACGSKSERNLLADTAKIVEKNKIICKRKDGDCRKLVTEALLALGYDAAICKSRWEKTPFYPAGEYEYIDVIIGNERVLVDVDFRSEFEIARPTKAYKAILQTVPYIFVGKCERLQSMVAIVSEAAKQSLKKKGMPVPPWRKVEYVRAKWLSPHTRVFPPSSSQGIKNNAEENQVLAGGAGEFKVSRCESDESNIVIQSKPPEIKAKSSLSALAAVLNETP 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01149 362 PANTHER RNA POLYMERASE SUBUNIT BETA-BETA PROTEIN, PUTATIVE (DUF506)-RELATED 25 355 - -
Adu06g01149 362 PANTHER OS03G0796600 PROTEIN 25 355 IPR006502 -
Adu06g01149 362 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 176 297 IPR006502 -
Adu06g01149 362 Pfam PDDEXK-like family of unknown function 79 297 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01149 Adu-Chr6 15224600 15226718 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01149 - - ahf:112754473 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01149 06 15224600 15226718 Adu06g01149 06 15224600 15226718 ECH
Adu06g01149 06 15224600 15226718 Adu02g00720 02 10611254 10612956 PCT