Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01134 ATGAACGTGCTTGAAAATGATTGTGTCTGCAATTTGTATGTAAGATTCTTCCAACGGAAGGAGAGCCACGCTGAGACACTTTCCCTTTCACCAAACACAAAAAACAACTACAAAATTCAGCACTTGTTTGTGTTGCTGCAATTTTGGGGTTTGGAAATTCATGAGCTTGGGGTAGTGGGAATGACTTTCTTCACTGCTGATTCATGTAAAGAAGCACACCCAAATGCCTTAAATCCACAGTCTTGGCTTCATATTGAAAGAGGGAAACTTCCCAAGCTGTCATCACATTCCTCTTCTGCCTCAATAGAATCCCTAATCAAGGTTCCACAGCCACCTATACTGCCATTCTATAAACCCATTGATTATGTGGAGGTCTTAGCTCAAATCCATGAAGAACTTGAGTCTTGTCCTCCTCAGGAGAGGTCAAATCTATTTCTGTTACAATACCAGGTCTTCAGGGGCCTTGGGGAAGTTAAGTTGATGCGAAGAAGTCTCCGGGGAGCTTGGCAGAGAGCCAACACTGTTCATGAGAAGATTATCTTTGGGGCGTGGTTGAAGTATGAAAAGCAAGGGGAAGAACTAATAGCTGACTTGCTAAGCACTTGTGGTAAATGTGCAAAGGAGTTTGGGCCTGTAGATGTTGCATCTCATCTTCAGTTTGATAGAAACGTAAGTTCCCAGGAGGGAATTTTGACCAACAAGAGCGATGTGTCGCAATATGTAATATTCACAATCGAAAATGAGAAGATAGTTTGTGATAGACAAAAGATTTCTGAACTTTCAGTACCATTCCATGCAATGCTAAAAGGGTATTTCAGTGAATCACTGTCAGATACTATAGATTTGTCCGAAAACAATATATCTATTTCGGGTATGAGGGCAATAAGTTATTTTAGTTTGGCTGGAAGTTTACCTGAGCTTCCTCCAAATCTTTTGTTGGAGATATTAGTTTTTGCAAATAAGTATTGTTGTGAAAGACTCAAAGATGCTTGTGATAGAAGACTTGCATCTTTAGTTTCCTCCAAAGAAGATGCTGTGGAGCTCATGGAATATGCTCTTGATGAAAACTCTGTCATCCTTGCTGCTTCTTGTCTACAAGTCCTCTTACGTGATCTTCCAAACTGTTTGAATGACAATCGTGTGGTGGATATATTTATTCATGCTAATAGGCAGCAGCTTGAAGTCATGGTTGGGCCAGGATTGTTTGCATTATTCTGCTTCTTAAGTGAAGTTTCTATGAACCTTAATTCTAGTTCAGACACAACAGCTCATCTCCTTGAAAGGTTAGTTGATTTCTCTGAAAATGACAAGCAGAGATTGCTCGCATTTCATCAGTTAGGATGTGTAAGATTCTTGAGGAAAGAATATGATGAAGCGCGTGGTTTGTTTGAGGGGGCTGTAAAAGTAGGCCATATGTATTCCATTGCAGGTTTAGCTAGACTGGACTATTTAAAGGGCGAGAAGCTTTTATCTTATGAGAAGCTCAGCTCAGTGATTGCCTCGGTTACTCCACTCGGATGGATGTACCAGGAGAGATCACTATATTGTGATGGTGATATAAGGTGGGAGGACCTTGAGAAAGCAACTGATCTAGACCCTACTCTTATATATCCTTATATGTATAGGGCTGCCAGTTTAATGAGGACACAGAATGCTCAAGCCGCACTAGAAGAAATCAATCGGATTCTTGGGTTCAAACTTTCATTAGAATGCCTGGAACTTCGTTTCTTTATTTATCTGACTCGTGAGGACTACAAAGCAGCTCTTTGTGATATCCAAGCTATTCTTACTCTGCGTCCGGACTATAGAATGTTCGAGGGACGTGTTGCTGCATCCCAACTCTGTACTCTGGTGCGTGAGCATGTTGAACCTTGGACAACAGCAGACTGTTGGGCACGGTTATACGATTGTTGGTCCGCAGTTGATGATATTGGATCTCTATCTGTTATCTACCAGATGCTCGAATCTGATGCAGCGAAAGGTGTTTTATACTTCAGACAGTCATTGCTTCTCTTGAGGCTGAACTGTCCTGAGGCAGCCATGCGGAGTTTACAATTAGCTCGGCAACACGCATCAAGTGAGCATGAACGGCTCGTATATGAGGGGTGGATCTTGTATGACACAGGCCATTATGAGGAAGGGCTCCATAAAGCTGAAGAGTCTATTAGTATTAAAAGGTCTTTTGAGGCCTTCTTCTTGAAGGCTTATGCACTGGCCGACTCTAGTCTAGATTCATCCTGTTCTGCAACTGTTATCTCGCTTTTGGAGGATGCCTTGAAGTGTCCTTCAGATAACTTGCGCAAAGGTCAGGCACTGAACAATCTTGGAAGTGTTTTTGTTGACTGTCAGAAGTATGACTCAGCAGCTGATTGCTATATCAATGCCCTTAAAATCCGGCATACCCGAGCCCATCAGGGTCTTGCTCGTGTTCATTATCTCAAACAAGATAAGGCTGCTGCCTATAAAGAGATGACTGAACTGATTCAGAAGGCAAAAAACAATGCATCTGCCTTCGAGAAGCGGTCAGAATACTGCGACCGGGAACTTGCACAGGCAGACCTGGAGATGGTGACTAGATTAGATCCACTTCGGGTGTATCCTTACAGATACCGTGCTGCTGTGTTGATGGACAACCGAAAGGAAGACGAAGCGATCGCTGAACTTTCCAGAGCCATTGCATTTAAAGCTGATTTGCACCTCTTGCATCTAAGGGCAGCATTCCATGAACACAAAGGAGATGTGTTGGGTGCACTCAGAGATTGTCGTGCCGCACTCTCTGTGGACCCTAACCACCAAGAAATGTTGGAACTGCACAGCAGAGTTAATAGCCATGAGCCATGA 2841 0.4294 MNVLENDCVCNLYVRFFQRKESHAETLSLSPNTKNNYKIQHLFVLLQFWGLEIHELGVVGMTFFTADSCKEAHPNALNPQSWLHIERGKLPKLSSHSSSASIESLIKVPQPPILPFYKPIDYVEVLAQIHEELESCPPQERSNLFLLQYQVFRGLGEVKLMRRSLRGAWQRANTVHEKIIFGAWLKYEKQGEELIADLLSTCGKCAKEFGPVDVASHLQFDRNVSSQEGILTNKSDVSQYVIFTIENEKIVCDRQKISELSVPFHAMLKGYFSESLSDTIDLSENNISISGMRAISYFSLAGSLPELPPNLLLEILVFANKYCCERLKDACDRRLASLVSSKEDAVELMEYALDENSVILAASCLQVLLRDLPNCLNDNRVVDIFIHANRQQLEVMVGPGLFALFCFLSEVSMNLNSSSDTTAHLLERLVDFSENDKQRLLAFHQLGCVRFLRKEYDEARGLFEGAVKVGHMYSIAGLARLDYLKGEKLLSYEKLSSVIASVTPLGWMYQERSLYCDGDIRWEDLEKATDLDPTLIYPYMYRAASLMRTQNAQAALEEINRILGFKLSLECLELRFFIYLTREDYKAALCDIQAILTLRPDYRMFEGRVAASQLCTLVREHVEPWTTADCWARLYDCWSAVDDIGSLSVIYQMLESDAAKGVLYFRQSLLLLRLNCPEAAMRSLQLARQHASSEHERLVYEGWILYDTGHYEEGLHKAEESISIKRSFEAFFLKAYALADSSLDSSCSATVISLLEDALKCPSDNLRKGQALNNLGSVFVDCQKYDSAADCYINALKIRHTRAHQGLARVHYLKQDKAAAYKEMTELIQKAKNNASAFEKRSEYCDRELAQADLEMVTRLDPLRVYPYRYRAAVLMDNRKEDEAIAELSRAIAFKADLHLLHLRAAFHEHKGDVLGALRDCRAALSVDPNHQEMLELHSRVNSHEP 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01134 946 Gene3D Tetratricopeptide repeat domain 842 945 IPR011990 GO:0005515
Adu06g01134 946 Coils Coil 814 841 - -
Adu06g01134 946 Gene3D Potassium Channel Kv1.1; Chain A 233 379 IPR011333 -
Adu06g01134 946 Gene3D Tetratricopeptide repeat domain 419 606 IPR011990 GO:0005515
Adu06g01134 946 SUPERFAMILY TPR-like 752 937 IPR011990 GO:0005515
Adu06g01134 946 PANTHER ETO1-RELATED 62 946 IPR044631 GO:0010105
Adu06g01134 946 SUPERFAMILY TPR-like 442 798 IPR011990 GO:0005515
Adu06g01134 946 Gene3D Tetratricopeptide repeat domain 658 832 IPR011990 GO:0005515
Adu06g01134 946 SMART tpr_5 865 898 IPR019734 GO:0005515
Adu06g01134 946 SMART tpr_5 569 602 IPR019734 GO:0005515
Adu06g01134 946 SMART tpr_5 440 473 IPR019734 GO:0005515
Adu06g01134 946 SMART tpr_5 695 728 IPR019734 GO:0005515
Adu06g01134 946 SMART tpr_5 900 931 IPR019734 GO:0005515
Adu06g01134 946 SMART tpr_5 769 802 IPR019734 GO:0005515
Adu06g01134 946 SMART tpr_5 661 694 IPR019734 GO:0005515
Adu06g01134 946 PANTHER ETO1-LIKE PROTEIN 1 62 946 - -
Adu06g01134 946 SUPERFAMILY POZ domain 241 335 IPR011333 -
Adu06g01134 946 ProSiteProfiles TPR repeat profile. 769 802 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01134 Adu-Chr6 15046026 15052103 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01134 - - gmx:100793740 1530.38