Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01131 ATGGAAGCAAAGTGCAGCACCATCAACTGCCGGCGGCCGGAGTTTCTTCCTCCACCAGCGGGAGGGACCCACCTGCCGGAGAGTCCAAGGGTGCCAATGGAGTTCCTGTCTCGCTCATGGAGTGCCTCAGCCCTTGAGGTCTGTAAGGCACTGGCTCCTCACCAACCACCACTTCATCATCTTCTTCCTCCTTCTTCCAAGACTTCTTCAAATGGTTCCTACACTACTTCTTCTTCCCTTATTCCCGAAGAAACCGGTTGTGGTGACTCTGAAGAGTTCCCATCCTCATCTCTCATCTCAACTACTTCTTTGTCCAAGAACCAGTTCTCTTTTGTTTCTTCTGCTACCTCTCAGCTTGTCCTTGAACGCATTATGTCACAATCAGCAAGAGAGGAAGTGTCGCCATTAACTTCTGGAAGACTATCACACAGTAGTGAGCCTCTGAATGGTGGTGGTTCGTTAACCGGAACAGACAGTCCCCCAATTTCACCTTCTGATGAATTTGATGATGTTGTTAAGTTTTTCCGGGCAAACAATTCCATTCACCCCTTATTCAATGGTGGAAGAGCCAGTGCTGCAATTGGCAATGGCGCGGCACCCTCAGGGCCAAAGACAACGGACATGGCTGTGGCCTCTGCAGCCACATTGGTGGCCGCGCAGTGCGTCGAGGCTGCTGAGGCAATGGGGGCTGAGAGAGACCACCTAGCTTCTGTGGTTAGCTCAGCTGTCAATGTCCGCTCTCATGATGATATCACTACTCTTACCGCTGCAGCTGCAACAGCTCTAAGAGGAGCAGCTACCCTGAAGGCAAGAGCATTGAAAGAGGTATGGAACATTGCTGCAGTGACACCATTAGAGAAAGGCAGAGGAGGGATGGGAATTTCTGGCAAAGGTAATACAAATACCAATAACAATAACAGCAACAATACCAGCACAAGTGATAGTGGGGAGATTCTCAATGGAGAAAATTTTCTAGGCGTCTGCAGCCAAGAGCTACTTGCTAAGGGAACTGAATTGCTCAAACGAACCCGCAAAGGTGATCTTCACTGGAAAATAGTTTCTGTTTACATACATCGAACAGGCCAGGTGATGCTGAAAATGAAGAGCAGACATGTTGCAGGAACCATTACCAAAAAGAAAAAGAATGTTGTGCAAGATATTTGCACAGACTTACCAGCATGGCCAGGGAGACATCTGCTTGATGATGGTGAAAAGCGGAAATACTTTGGGTTGAAGACAGATGCAAGGGGGATTGTGGAGTTTGAGTGTAGAAATCAAAGGGAATATGATATCTGGACTCAAGGGGTCTCCAGGCTTCTTTCCATTGTTGCACAAAGACAGAACAGATTTGGAAACTGA 1359 0.4798 MEAKCSTINCRRPEFLPPPAGGTHLPESPRVPMEFLSRSWSASALEVCKALAPHQPPLHHLLPPSSKTSSNGSYTTSSSLIPEETGCGDSEEFPSSSLISTTSLSKNQFSFVSSATSQLVLERIMSQSAREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRASAAIGNGAAPSGPKTTDMAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNIAAVTPLEKGRGGMGISGKGNTNTNNNNSNNTSTSDSGEILNGENFLGVCSQELLAKGTELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVQDICTDLPAWPGRHLLDDGEKRKYFGLKTDARGIVEFECRNQREYDIWTQGVSRLLSIVAQRQNRFGN 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01131 452 MobiDBLite consensus disorder prediction 295 317 - -
Adu06g01131 452 PANTHER AUXIN CANALIZATION PROTEIN 206 451 - -
Adu06g01131 452 PANTHER AUXIN CANALIZATION PROTEIN 7 205 - -
Adu06g01131 452 MobiDBLite consensus disorder prediction 129 165 - -
Adu06g01131 452 MobiDBLite consensus disorder prediction 290 317 - -
Adu06g01131 452 Pfam Auxin canalisation 201 288 IPR008546 -
Adu06g01131 452 Pfam Auxin canalisation 26 189 IPR008546 -
Adu06g01131 452 MobiDBLite consensus disorder prediction 58 97 - -
Adu06g01131 452 Pfam Plant pleckstrin homology-like region 338 443 IPR013666 -
Adu06g01131 452 MobiDBLite consensus disorder prediction 129 162 - -
Adu06g01131 452 MobiDBLite consensus disorder prediction 62 97 - -
Adu06g01131 452 PANTHER EXPRESSED PROTEIN 206 451 IPR040269 -
Adu06g01131 452 PANTHER EXPRESSED PROTEIN 7 205 IPR040269 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01131 Adu-Chr6 15007887 15011439 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01131 - - aip:107645207 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01131 06 15007887 15011439 Adu06g01131 06 15007887 15011439 ECH
Adu06g01131 06 15007887 15011439 Adu02g00697 02 9995944 10003544 PCT