Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01062 ATGCTTCTTCTTCCACCGCCATTCCTGGTCCTCATCTTCCTCATTCTCCAAACAGTAACACCACTACTACTCTCCCCAATCTCAAAAGACCCCACCACCCAACTCTACACCCTCTCCGTCTACGTTCAAACCCCACTCCAACCCACCACCCTCCACCTCCACCTTGGCTCCTCCCTCACCTGGCTCCTCTGCAACAACTACAACCACCGCATTCCCTGCAACTCCTCTCTCTGTGCCACCTTCAACTCCGGCGGAGCCTGCTCCAACAACACCTGCTCCTTCTTCCCTGAAAACCCCATCACCAGAAAGACTCTCCTCTCCACCGCCAACCTCGACACCCTCGCTCTTCCCACCTCGGACGGGTCAACTCAGGGTCCACTCGTCCAAATCAAAGACTTCGTCTTCTCCTGCTCCACAGCCCAATTACTCCAAGGCCTGGCCCAAAACGCCACTGGTCTAGCCGCTTTGGGCCGAAACAACCTCTCCCTCCCGGCCCAAATAAGCGCCTCTTTGTCCACCACTCGTTGCTTCGCTCTCTGCTTACCCGCTTCAACCCAGAGTCCCGGCGCGGCTATCTTCGCTTCGACCGGACCGTACATTTTTAATTCCAAAATTGACCTCTCCAAATCTCTTGTTTACACTCCACTCATTGTGAACCCCGTTGCGGATACTGTTATCTCTTACAACGGACAACCGTCCGATGAGTATTTCGTTAACGTGACTTCAATTCGGATCAACGGTAAGGATGTTCCCATCAACGCGTCGATCCTGGCCATTGATCAGGACGGGCTAGGGGGGACCAAGATAAGCACGTCAGAGCCGTACACCGTAATGGAAAGTTCTGTATACAAACGGTTCGTAGAGCTGTTTGTGAATGAGTCGTTGGCTTTTAACTTGACGGCAACGGAAGCCGTTGAGCCGTTCGGGGTGTGTTACCGTGAGGGGGACCTCAGTGAGACGCGCGTTGGACCCGCGGTGCCGACCGTGGATTTTGTGATGCACAGCGATGACGTGTTTTGGAGAACATTCGGGGGGAATTCGATGGTGAGGATTGAAAAGGAAGGGGTGGGTATGGATTTGTGGTGTTTGGGTTTTGTTGATGGTGGGGCGCATAGGAGGACCAGCGTTGTTATTGGAGGGCATCAATTGGAGGATAATCTCGTGCAGTTTGATCTTGATTCCAATATATTTGGGTTCAGCTCATCGCTGTTGCTTCAAGCCACAACTTGTTCTAATCTTAATATCTCTAATTTTGTCAACAATAGAATATAG 1272 0.5197 MLLLPPPFLVLIFLILQTVTPLLLSPISKDPTTQLYTLSVYVQTPLQPTTLHLHLGSSLTWLLCNNYNHRIPCNSSLCATFNSGGACSNNTCSFFPENPITRKTLLSTANLDTLALPTSDGSTQGPLVQIKDFVFSCSTAQLLQGLAQNATGLAALGRNNLSLPAQISASLSTTRCFALCLPASTQSPGAAIFASTGPYIFNSKIDLSKSLVYTPLIVNPVADTVISYNGQPSDEYFVNVTSIRINGKDVPINASILAIDQDGLGGTKISTSEPYTVMESSVYKRFVELFVNESLAFNLTATEAVEPFGVCYREGDLSETRVGPAVPTVDFVMHSDDVFWRTFGGNSMVRIEKEGVGMDLWCLGFVDGGAHRRTSVVIGGHQLEDNLVQFDLDSNIFGFSSSLLLQATTCSNLNISNFVNNRI 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01062 423 PANTHER ASPARTYL PROTEASE-RELATED 10 414 IPR001461 GO:0004190|GO:0006508
Adu06g01062 423 Gene3D Acid Proteases 17 194 IPR021109 -
Adu06g01062 423 Pfam Xylanase inhibitor C-terminal 235 400 IPR032799 -
Adu06g01062 423 PANTHER OS05G0403000 PROTEIN 10 414 - -
Adu06g01062 423 Pfam Xylanase inhibitor N-terminal 36 193 IPR032861 -
Adu06g01062 423 Gene3D Acid Proteases 197 417 IPR021109 -
Adu06g01062 423 ProSiteProfiles Peptidase family A1 domain profile. 36 400 IPR033121 -
Adu06g01062 423 SUPERFAMILY Acid proteases 29 409 IPR021109 -
Adu06g01062 423 CDD xylanase_inhibitor_I_like 41 403 IPR033868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g01062 Adu-Chr6 13349081 13350352 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01062 - - gmx:100800584 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01062 06 13349081 13350352 Adu06g00386 06 4641907 4643169 ECH
Adu06g01062 06 13349081 13350352 Adu06g01062 06 13349081 13350352 ECH