Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g01028 ATGAAGCGAGTTTGGAGATTCACTTCAGACGCAGTAGCGCAAGCCGAACACTTCTGCTTCCACTCCCATGGCATCCCTAACCCTAAACCTAATATTCCGTCCTTTACTACCACCACTGCCGCATTCACATCGCCTGGCCTCACTCGCCGCCACTGCACCTCCGGTACCCCTCCTCCTCCTCACCCGCTTCAAGATATTACTCCCCTCTTCATCGAGAAACGCAGGCTTCCGTTCGGAGAGGATCTCATCAATAAAGCATCGGTTTTGAAGAACCAACTGGTTCTCGAAGCCTCGGATTCCAATCGGGTAATTGAGATCCTCGATGAGAACTCTGCATCACTGATTGAAAGTCATGTAGGTGGATCTGTGCTGCTCGAGCTCTTGAATCAGTTGGATTCGTGGCCTTCCTTGGCCCTTCAGGTGTTTGATTGGAGGAGGGAGAAGAAGAATTCTGGTGTTGACTCCCCAATGAGTGTATATGAGTATTCTAAGGGCATAAAAGCTGCAGGTAGATGTAAAGATGTTCATCATGCCGTTGAGATCTTTCGAGACGCTGCGAAGAAGGGCATGAGAACGACCAGCACTTACAATGCATTGATGAGTGCTTTTATGTTCAATGGTCTTGCAAAGATGTGTCACGAGTTGTTCTGTGATATGAAGAAGCATGCAGCTTGTCCTCCTACAATTGCCACATACAATATTCTCATATCTCTTTACTCTCGCTTGGTGCTGGTGGATTACATGGAAGAAACATACCAGGCGATAAAAGAGTCGGACCTCCAACTCAGTGAGAATACTTATAATTATTTGATTGCTGGATATATCTCGGCTTCGATGTGGCATGACATGGAGAGAGTTTTTCAAATGATGAAGGGAGGCCCTGTCAAGCCTAACTTGAAAACCCACCTGCTAATGCTTCGAGGCTATGGACAATCAGGTAATCTGGAGAAGATGGAAGAGATGTATTCTCTAGTAAGGGATCATGTAAACAAAAAAGAAATTCCATTGATCAGGGCCATGATATGTGCGTATTGTAAAAGTTCAGATTCGGATAGAGTGAAGAAGGTAGAGGGATTGCTGAAGCTTATTCCACAAGAACATTACAGACCATGGTTGGACGCCTTGTTGATTAAGCTCTATTCCCAGGAGGACTGGTTAGAGGAAATGGAGATTACAATTAATGAGGCTTTTGAGCGCAGAACCCGGATAGCCTCAGCAAGTACTATGAGATGCATTACTGCAACTTATTATCGGTGTAATGCAATAGAAAGGCTAGAAAATTTTGTGAAACGTGCTGAATGTGCTGGGTGGAGAATCTGTCGGTCCTTGTATCATTGTAAGCTTGTCTTATATGGATCACATAATCGTATTGATGAGATGCGTTATGTCTTTGATGAAATGGAAGGTGTTAAAATTAATTGCACAAAAAAAACATTGTGGATAATGTACAAAGCTTACCTGAACCATGGTCAGAGATCCATGGTTCTGAAAATACTGGGACAAATGTTCAAGCATGGTTATGAAGTCCCCTTGCATGCATTTCCATCATAA 1551 0.4384 MKRVWRFTSDAVAQAEHFCFHSHGIPNPKPNIPSFTTTTAAFTSPGLTRRHCTSGTPPPPHPLQDITPLFIEKRRLPFGEDLINKASVLKNQLVLEASDSNRVIEILDENSASLIESHVGGSVLLELLNQLDSWPSLALQVFDWRREKKNSGVDSPMSVYEYSKGIKAAGRCKDVHHAVEIFRDAAKKGMRTTSTYNALMSAFMFNGLAKMCHELFCDMKKHAACPPTIATYNILISLYSRLVLVDYMEETYQAIKESDLQLSENTYNYLIAGYISASMWHDMERVFQMMKGGPVKPNLKTHLLMLRGYGQSGNLEKMEEMYSLVRDHVNKKEIPLIRAMICAYCKSSDSDRVKKVEGLLKLIPQEHYRPWLDALLIKLYSQEDWLEEMEITINEAFERRTRIASASTMRCITATYYRCNAIERLENFVKRAECAGWRICRSLYHCKLVLYGSHNRIDEMRYVFDEMEGVKINCTKKTLWIMYKAYLNHGQRSMVLKILGQMFKHGYEVPLHAFPS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g01028 516 PANTHER OS05G0407900 PROTEIN 1 515 - -
Adu06g01028 516 TIGRFAM PPR: pentatricopeptide repeat domain 266 298 IPR002885 -
Adu06g01028 516 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 263 297 IPR002885 -
Adu06g01028 516 Pfam PPR repeat family 192 237 IPR002885 -
Adu06g01028 516 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 192 226 IPR002885 -
Adu06g01028 516 Gene3D Tetratricopeptide repeat domain 166 373 IPR011990 GO:0005515
Adu06g01028 516 Gene3D Tetratricopeptide repeat domain 376 514 IPR011990 GO:0005515
Adu06g01028 516 Pfam Pentatricopeptide repeat domain 255 310 IPR002885 -
Adu06g01028 516 PANTHER EXPRESSED PROTEIN 1 515 IPR044179 GO:0003729
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g01028 157 388 Miscellaneous Gene Families AT4G11690 22.358 8.26e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g01028 - - gmx:100792116 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g01028 06 12790606 12793486 Adu06g01028 06 12790606 12793486 ECH