Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00958 ATGGCATCAGAGAAGAGTTTTCTTCTTGTTGTGGCTGTGCTGCTTCTGCTCTCGCCTGCACTGGGAGCAAAGGAGCGGTGCAATCCACAGGACAAGAAAGCTCTCCTTCAGATAAAAAAGGACTTCAACAACCCTTACGTGCTGACTTCATGGAAGCCCGAAGAGGATTGCTGCACCTGGTACTGCGTAGAGTGCGACCGGAAAACCAACCGCATTGTCACCATCAACATTTACCTTTCTGTCCCTGAGACTAATTTCTCCGCCAAAATCCCAGACTCCATCGGCCTCCTCCCTTACCTCCAGACCCTCACACTCCACCACCTCCCCTACCTTACCGGCCCAATTAACCCCGCCATCGCCAAGCTCACCAACCTCAACTTCCTCCAAATTAGCCGCACCAACATCTCCGGCCCGGTACCTGCCTTCCTGGCCCAGCTCAAAAAACTCACGTATATTGACCTCTCCTTCAACAACTTATCAGGCTCTATTCCCCCCGAGTTAGGCCAGCTGCCCAAGCTTGAGGCCCTGCATCTCGACCGAAACCACTTGAGCGGGCCCATCCCTGCCTCCTTCGGCTCCTTGAAGTCCAACCCGGACATATACCTCTCCCACAACAACCTCTCCGGGCCCATCCCTCCCTCGTTCTTCAGACTCAACTTGACGCGGTTGGATCTGTCGAGGAACAAGCTCGTGGGCGATGCGTCTGGGCTTTTCGGGGCCACCAAGGCGACGGAGACGATAGACCTTTCGAGAAACCAGTTTGCATTCGACCTGAGCAAGGTCAAGTTCTCAAAGACTATAATTTCATTGGATTTGAACCACAACAAGTTGTACGGTGCGCTACCCGCGAGCCTGACCGCACTAGAAAATCTACAGCTCTTCAATGTGAGCTACAACAGGCTTTGCGGGAAGATCCCTGTGGGTGGGAATCTTCAGAAGAACGATGTTTACTCATATTTTCATAACAAGTGTTTGTGTGGTTCTCCACTCCCCAAATGCAGCAACTGA 1008 0.5248 MASEKSFLLVVAVLLLLSPALGAKERCNPQDKKALLQIKKDFNNPYVLTSWKPEEDCCTWYCVECDRKTNRIVTINIYLSVPETNFSAKIPDSIGLLPYLQTLTLHHLPYLTGPINPAIAKLTNLNFLQISRTNISGPVPAFLAQLKKLTYIDLSFNNLSGSIPPELGQLPKLEALHLDRNHLSGPIPASFGSLKSNPDIYLSHNNLSGPIPPSFFRLNLTRLDLSRNKLVGDASGLFGATKATETIDLSRNQFAFDLSKVKFSKTIISLDLNHNKLYGALPASLTALENLQLFNVSYNRLCGKIPVGGNLQKNDVYSYFHNKCLCGSPLPKCSN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00958 335 PANTHER POLYGALACTURONASE INHIBITOR 2 6 334 - -
Adu06g00958 335 Pfam Leucine rich repeat 124 183 IPR001611 GO:0005515
Adu06g00958 335 PANTHER POLYGALACTURONASE INHIBITOR 1 6 334 - -
Adu06g00958 335 Pfam Leucine Rich repeat 219 234 IPR001611 GO:0005515
Adu06g00958 335 SUPERFAMILY L domain-like 26 332 - -
Adu06g00958 335 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Adu06g00958 335 Gene3D Ribonuclease Inhibitor 26 334 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00958 Adu-Chr6 11870500 11871739 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00958 79 332 Receptor kinase-like Gene Family AT2G15080 26.974 4.12e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00958 - - aprc:113862147 436.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00958 06 11870500 11871739 Adu06g00958 06 11870500 11871739 ECH