Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00883 ATGAAGAACCAGAAGAACTACTGTGCGCGTAATGATATATACAACATGATGATTAGGTTGCATGCTAGGCATAACCGAACTGACCAGGCTCGTGGATTGTTCTTTGAGATGCAAGAATGGAGGTGTAAACCTGATGCTGAGACTTATAATGCTCTTATCAATGTGCATGGTCGAGCTGGACAGTGGCGTTGGGCGATGAATATCATGGATGACATGCTGCGAGCTGCTATTCCGCCAAGCCGGTCAACCTATAACAACTTGATAAACGCCTGTGGCTCTAGTGGAAATTGGAAAGAAGCACTTAATGTTTGCAAGAAAATGACAGACAATGGAGTTGGGCCTGATCTTGTTACACACAATATTGTGTTATCTGCATTTAAAAGTGGGGCTCAGTATTCAAAAGCTCTGTCTTATTTTGAACTAATGAAGGGAACTCACATTCGTCCTGACACAACTACCCTTAACATTATTATCCATTGTCTTGTGAAGCTTCAACAGTATGACAAAGCCATCGATATTTTCAATTCCATGAGGAAAAATAAGTCAGATTGTAGTCCTGATGTTGTAACTTTTACCAGCATCATACACTTGTATTCTACATGTGGGCAAGTTGAAAATTGCGTGGCTGCATTTAATATGATGCTTGCAGAAGGGCTGAAACCCAACACAATCTCATATAATTCACTAATTGGTGCATATGCTGCTTGCGGGATGGACAAGGAGGCACTTATGGTTTTCAATGAGATCAAACAAAATGGTTTCCGGCCAGATATTGTGTCCTATACATCTTTGCTTAATGCTTATGGAAGATCACAAAAGCCTCAAAAAGCAAGAGAAATATTTGCAATGATAAAGAAAAACAGATTGAAGCCTAACATTGTTACTTACAATGCACTAATTGATGCCTATGGATCTAATGGTTTGTTGGCGGAGGCAATTGAAATATTGCGTGAGATGGAACAAGATGGAATTTATCCAAATGTTGTCTCAATATGCACTCTCTTGGCTGCCTGTGGGCGGTGCAGTCAGAAGGTGAAGATTGATACAATCCTATCAGCAGCTGAGATGCGAGGCATTAAATTGAATACAGTTGCCTATAATTCAGCTATAGGAGCCTATATGAATGTGGGGAAATATGACAAAGCTGTAGGCTTGTATAAATCTATGAGGAAGAAAAATATAAAACCTGATTCTGTTACTTGCACTGTGTTGATAAGTGGTTGTTGTAATATGTCAAAATATAGTGAAGCCCTAGTTTTCATGGAAGAAATGATGCATCTTAGACTTCCTTTGACCAAAGAGGTCTACTCTTCTGCCATATGTGCTTACAGCAAACTGGGACAAGTCATAGAAGCAGAATCCACATTTAACTTGATGAAATCATCTGGTTGCTATCCTGATGTAGTGGCATATACTGCAATGCTTGATGCATACAATGCAGGAGAGAATCGGGAAAAAGCATATGCACTCTTTGAAGAAATGGAAGTGAATGGCATCAAGCTAGATACGATTGCATGTGCTGCCCTGATGAGGGCCTTTAATAAAGGTGGTCAACCAGGAAGGGTCCTCAGTCTTGCAGAAAGTATGAGAGAAAAAGATATTCCTTTCAGTGATACCATTTATTTTGAAATGGTATCTGCCTGTAGCTCATTGCATGATTGGAGGACAGCGGTTGATATCATGAAGTACATAGAGCCCTCACTTCCTGTAATTTCGTCTGGATGCTTGAACCTTTTCCTCAAATTTTTAGGAAAAAGTGGAAAGATTGAAACTATGTTGAAGTTATTCTACAAGATGTTGGCATCGGGTGCTGATATTAACCTCAACACTTATTCTGTTATATTGAAAACCCTCTTATCCTCTGGAAACTGGAGGAAATATTTAGAGGTACTACAATGGATGGAGGATTCAGGAATTCAACCATCAAACGAAATGTACCATGATATATCCTCCTATTCACAAAGATGTGTTGGGGCTGAGAATGCTGCAGTGGTAAAAGAAAGACTTGAATCCGTGAAGGGAAAATCCAGGGAACGATTTTCTCCAAGCCAATCACGTGAGTCCACTGCACTCAGCTCACCCTTGTTTTCGAATTAG 2097 0.3996 MKNQKNYCARNDIYNMMIRLHARHNRTDQARGLFFEMQEWRCKPDAETYNALINVHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIVLSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIIIHCLVKLQQYDKAIDIFNSMRKNKSDCSPDVVTFTSIIHLYSTCGQVENCVAAFNMMLAEGLKPNTISYNSLIGAYAACGMDKEALMVFNEIKQNGFRPDIVSYTSLLNAYGRSQKPQKAREIFAMIKKNRLKPNIVTYNALIDAYGSNGLLAEAIEILREMEQDGIYPNVVSICTLLAACGRCSQKVKIDTILSAAEMRGIKLNTVAYNSAIGAYMNVGKYDKAVGLYKSMRKKNIKPDSVTCTVLISGCCNMSKYSEALVFMEEMMHLRLPLTKEVYSSAICAYSKLGQVIEAESTFNLMKSSGCYPDVVAYTAMLDAYNAGENREKAYALFEEMEVNGIKLDTIACAALMRAFNKGGQPGRVLSLAESMREKDIPFSDTIYFEMVSACSSLHDWRTAVDIMKYIEPSLPVISSGCLNLFLKFLGKSGKIETMLKLFYKMLASGADINLNTYSVILKTLLSSGNWRKYLEVLQWMEDSGIQPSNEMYHDISSYSQRCVGAENAAVVKERLESVKGKSRERFSPSQSRESTALSSPLFSN 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00883 698 Gene3D Tetratricopeptide repeat domain 515 691 IPR011990 GO:0005515
Adu06g00883 698 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 257 291 IPR002885 -
Adu06g00883 698 Pfam PPR repeat family 435 478 IPR002885 -
Adu06g00883 698 Pfam PPR repeat family 44 91 IPR002885 -
Adu06g00883 698 Pfam PPR repeat family 362 410 IPR002885 -
Adu06g00883 698 Pfam PPR repeat family 186 233 IPR002885 -
Adu06g00883 698 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 115 149 IPR002885 -
Adu06g00883 698 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 607 641 IPR002885 -
Adu06g00883 698 PANTHER OS07G0213300 PROTEIN 1 650 - -
Adu06g00883 698 MobiDBLite consensus disorder prediction 672 698 - -
Adu06g00883 698 SUPERFAMILY TPR-like 160 457 IPR011990 GO:0005515
Adu06g00883 698 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 187 221 IPR002885 -
Adu06g00883 698 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 292 326 IPR002885 -
Adu06g00883 698 MobiDBLite consensus disorder prediction 683 698 - -
Adu06g00883 698 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 397 431 IPR002885 -
Adu06g00883 698 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 150 184 IPR002885 -
Adu06g00883 698 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 432 466 IPR002885 -
Adu06g00883 698 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 362 396 IPR002885 -
Adu06g00883 698 Gene3D Tetratricopeptide repeat domain 322 429 IPR011990 GO:0005515
Adu06g00883 698 Gene3D Tetratricopeptide repeat domain 1 107 IPR011990 GO:0005515
Adu06g00883 698 Gene3D Tetratricopeptide repeat domain 180 249 IPR011990 GO:0005515
Adu06g00883 698 Gene3D Tetratricopeptide repeat domain 108 179 IPR011990 GO:0005515
Adu06g00883 698 Gene3D Tetratricopeptide repeat domain 430 497 IPR011990 GO:0005515
Adu06g00883 698 Gene3D Tetratricopeptide repeat domain 250 321 IPR011990 GO:0005515
Adu06g00883 698 Pfam PPR repeat 13 42 IPR002885 -
Adu06g00883 698 PANTHER RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED 1 650 - -
Adu06g00883 698 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 467 501 IPR002885 -
Adu06g00883 698 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 80 114 IPR002885 -
Adu06g00883 698 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 45 79 IPR002885 -
Adu06g00883 698 SUPERFAMILY TPR-like 44 216 IPR011990 GO:0005515
Adu06g00883 698 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 10 44 IPR002885 -
Adu06g00883 698 TIGRFAM PPR: pentatricopeptide repeat domain 294 328 IPR002885 -
Adu06g00883 698 TIGRFAM PPR: pentatricopeptide repeat domain 435 468 IPR002885 -
Adu06g00883 698 TIGRFAM PPR: pentatricopeptide repeat domain 364 398 IPR002885 -
Adu06g00883 698 TIGRFAM PPR: pentatricopeptide repeat domain 399 427 IPR002885 -
Adu06g00883 698 TIGRFAM PPR: pentatricopeptide repeat domain 469 503 IPR002885 -
Adu06g00883 698 TIGRFAM PPR: pentatricopeptide repeat domain 224 258 IPR002885 -
Adu06g00883 698 TIGRFAM PPR: pentatricopeptide repeat domain 117 151 IPR002885 -
Adu06g00883 698 TIGRFAM PPR: pentatricopeptide repeat domain 13 46 IPR002885 -
Adu06g00883 698 TIGRFAM PPR: pentatricopeptide repeat domain 259 293 IPR002885 -
Adu06g00883 698 TIGRFAM PPR: pentatricopeptide repeat domain 153 187 IPR002885 -
Adu06g00883 698 TIGRFAM PPR: pentatricopeptide repeat domain 48 80 IPR002885 -
Adu06g00883 698 TIGRFAM PPR: pentatricopeptide repeat domain 189 223 IPR002885 -
Adu06g00883 698 TIGRFAM PPR: pentatricopeptide repeat domain 83 115 IPR002885 -
Adu06g00883 698 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 222 256 IPR002885 -
Adu06g00883 698 Pfam Pentatricopeptide repeat domain 103 162 IPR002885 -
Adu06g00883 698 Pfam Pentatricopeptide repeat domain 245 306 IPR002885 -
Adu06g00883 698 Pfam Pentatricopeptide repeat domain 595 643 IPR002885 -
Adu06g00883 698 Pfam Pentatricopeptide repeat domain 310 339 IPR002885 -
Adu06g00883 698 Pfam Pentatricopeptide repeat domain 490 534 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00883 95 651 Glycosyltransferase AT1G05670 22.760 1.37e-36 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00883 - - adu:107492625 1400.19