Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00877 ATGGAGAATGAAAATAAGAATAAGAATAATAATGTTGTTATTAGGAGGGAAGTGTGTTTGGTTTGGGAAGAATTGACAGTGGTTATTAACAGCGGCAAGAGCAGTAATAATAATAGTGAAAGAAGGAAGAAAGTGTTGAACGGAATAAGTGGATATGCTGAACCAAACAGAATCATGGCTCTAATTGGTCCTTCTGGTGCTGGCAAATCCACTTTCCTTGATGCTCTTGCTGGAAGACTTGCAACCAATGTCAGCATTACTGGAAATGTGCTATTGAATGGCACTAAGAGAACCACATCCTCCAGAGATCTTTCTTATGTAACACAAGAAGACCATTTCTTAGGAACACTAACTGTGAGGGAAACACTCACATATGCTGCTTATCTGAGACTTGCTGCAAACATGACCAATGATGAGATTGACAAGGTTGTAGCCAAGACGCTCGACGAAATGGGTCTTCAAGAATGTGCAGAGAGCAGGCTTGGGAATTGGCATTCAAGAGGAATAAGTAAAGGAGAGAAGAGAAGACTCAGCATTGGCATTGAGATCTTAACTCAGCCTCATATACTTTTGCTTGATGAACCTACTAGTGGATTGGATAGTGCTGCTGCTTTCTTTGTCATTTCATCTCTCAGAAGCATTGCACATGATGGCAGAATTGTTATCTGCTCCATTCACCAACTTAGCAGTGAAGTTTTCAATCTCTTTGATGACATGGTGATCCTCGCAGGAGGTGAAACTGTGTATTTTGGAGAAAGGACTAAAGCTGTTAAGTTCTTTGAAGATGCAGGGTTTCCTTGTCCAACAAGAAAGAACCCTCCTGAGCACTTCCTTCGTTGCATCAGCCCCGAATTCGATAGTGTTCTGACTTTGATACAGTCCAAGAATGCCAATAATGAAGCACCATCATCATGGAATTTTCTAATGAATATGACAACAGAGGAGATTAAATGGAAACTTATAAACTGTTTCAAGAATTCTAGGCAGTTAGCAAATGCAAGGGAAAAGATCAGAGAAATCAAACTAAGAAAAGAACCTCCAATAGAGAGGGCATATGATACTAGAACACTGAAGCAGCTATGCACATTGACTCATAGATCATTCCTTAACATGACCAGAGACATTGGTTACTATTGGTTAAGGATTCTGTTCTACATGTTAGTATCAGTGTGTGCTGGTTTTCTTTATCTAAATGTAGGAACTAGTAATAGTGCAATCTTATCAAGAAGCAAGATTGATGGATTCATCTATGGCTTCATGATCTTTCTGTGCATTGGTGGCTTACCCTTCTTCCTTGAGGAGTTAAAGGTCTTCGAGCGCGAAAGATTCGGAAGGCATTATGGAGAGGGAGTTTTTGTTCTTTCGAGTTTCATCTCGTCACTTCCTTTTGTTGTTTTCATTTCCCTGACTTCAGGAACAACACTTTACCACATGGTGAATTTTCACCCTGGTTTCTCTCATTACTGCTACTTTTGCATAAACCTCTTCTGCAGCATTTCTGTCACAGAAGGCTCCATGCTTTTAGTTGCTGCTCTTGTTTCCAACCAGCTCCTAGCTATTGGAACATCAGCTGCTATAACTATACTGATGATGATGCCATCAAATGCATTTCGAAGAATGATTGACATTCCGAAATTCTTCTGGCGCTATCCCATGTCCTACATCAGTTATATCGCGTGGTCAATACAGCAGGGGCAATACAAGAATGACCTGATTGGACTTGAATTTGAAGGAATGATGCCAGGAGACAGAAAGATAAAGGGTGAAGTGATACTTGAAGAAATGTTTGGAATAAGAACAGATTATTCAAAATGGTGGGACATAGGAGCCTTGGTTTGCTTGTTAATATCATACAGATTGATGTTTTTCTTGGTTCTTAAGCATAGGGAGAGAGCTTCATCACTATTTCACACCATTTTACTCACAAGATCCTCCCTCAAACTCAATCTCAATCTCAATCTCAATCACAAACATATTTCTTCCAAGAGACACCATTCCCTATATCCTTTCTCATCTCAACATGGATTTACCTCTCCAATAATATCCTA 2048 0.3975 MENENKNKNNNVVIRREVCLVWEELTVVINSGKSSNNNSERRKKVLNGISGYAEPNRIMALIGPSGAGKSTFLDALAGRLATNVSITGNVLLNGTKRTTSSRDLSYVTQEDHFLGTLTVRETLTYAAYLRLAANMTNDEIDKVVAKTLDEMGLQECAESRLGNWHSRGISKGEKRRLSIGIEILTQPHILLLDEPTSGLDSAAAFFVISSLRSIAHDGRIVICSIHQLSSEVFNLFDDMVILAGGETVYFGERTKAVKFFEDAGFPCPTRKNPPEHFLRCISPEFDSVLTLIQSKNANNEAPSSWNFLMNMTTEEIKWKLINCFKNSRQLANAREKIREIKLRKEPPIERAYDTRTLKQLCTLTHRSFLNMTRDIGYYWLRILFYMLVSVCAGFLYLNVGTSNSAILSRSKIDGFIYGFMIFLCIGGLPFFLEELKVFERERFGRHYGEGVFVLSSFISSLPFVVFISLTSGTTLYHMVNFHPGFSHYCYFCINLFCSISVTEGSMLLVAALVSNQLLAIGTSAAITILMMMPSNAFRRMIDIPKFFWRYPMSYISYIAWSIQQGQYKNDLIGLEFEGMMPGDRKIKGEVILEEMFGIRTDYSKWWDIGALVCLLISYRLMFFLVLKHRERASSLFHTILLTRSSLKLNLNLNLNHKHISSKRHHSLYPFSSQHGFTSPIIS 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00877 682 ProSitePatterns ABC transporters family signature. 169 183 IPR017871 GO:0005524
Adu06g00877 682 Pfam ABC transporter 46 197 IPR003439 GO:0005524
Adu06g00877 682 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 19 642 - -
Adu06g00877 682 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 20 269 IPR003439 GO:0005524
Adu06g00877 682 SMART AAA_5 55 246 IPR003593 -
Adu06g00877 682 Pfam ABC-2 type transporter 359 563 IPR013525 GO:0016020|GO:0140359
Adu06g00877 682 CDD ABCG_EPDR 20 251 - -
Adu06g00877 682 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 263 IPR027417 -
Adu06g00877 682 Pfam ABC-2 type transporter 226 306 IPR043926 GO:0140359
Adu06g00877 682 Gene3D - 27 263 IPR027417 -
Adu06g00877 682 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 19 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00877 Adu-Chr6 10686350 10690652 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00877 44 238 Calmodulin-binding Proteins AT2G36910 28.436 2.06e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00877 - K05681 aip:107646291 1283.09