Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00872 ATGTCTGATGCGTTTTGCTCCGACTGCAAGCGGCAGACGGAGGTGGTTTTCGACCACTCCGCCGGCGACACCGTCTGCTCCGAGTGCGGTCTCGTTCTCGAGTCCCACTCCATTGACGAGACCTCGGAGTGGAGGACCTTTGCTAACGAGTCCGGGGATAACGATCCGGTTCGTGTCGGCGGGCCCACTAACCCGCTCCTTGCCGACGGTGGCCTTAGCACTGTCATCGCCAAGCCCAACGGCGCCAGCGGCGAGTTGTTCTCGTCTTCCCTTGGCCGCTGGCAGAACCGTGGCTCTAATCCTGATCGCGGTCTCATCCTCGCTTTCAAGACAATCGCCACTATGTCCGATAGGTATCGGTTTTGCGCGCTTGTTGATCGAGCTAATGAGATATACAAGCGGGTTGAAGATCAGAAGTCTAGTAGAGGAAGAAATCAGGATGCATTATTGGCTGCTTGCCTCTACATTGCTTGTAGACAGGAGGACAAGCCACGCACTGTAAAGGGTACCACCTATGATTTTTTTAACATCTGGATGCTAAAAGAATACATAGTGAAACAACTGGGTTTGGAGAAAGGTCAATCTGTGGAGATGGGAACAATACATGCTGGTGACTTTATGAGGCGATTTTGTTCTAATCTTGGTATGAATAATCAAGCTGTCAAAGCTGCTCAAGAAGCTGTTCAGAGATCAGAAGAGTTTGATATACGGCGGAGTCCCATATCAATTGCTGCAGCAGTGATATACATCATAACTCAGCTGTCAGATGATAAAAAAGCTCTCAAAGAAATATCATTAGCCACAGGAGTTGCAGAAGGAACCATTAGGAACTCGTACAAGGATCTTTATCCTCATGTTTCAAAAATAATACCAAACTGGTATGCAAAGGAGGAAGATTTGAAGAACCTTTGCAGCCCTTGA 921 0.4843 MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGGPTNPLLADGGLSTVIAKPNGASGELFSSSLGRWQNRGSNPDRGLILAFKTIATMSDRYRFCALVDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGTTYDFFNIWMLKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQRSEEFDIRRSPISIAAAVIYIITQLSDDKKALKEISLATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00872 306 SMART cyclin_7 205 284 IPR013763 -
Adu06g00872 306 SMART cyclin_7 110 189 IPR013763 -
Adu06g00872 306 CDD CYCLIN 201 283 IPR013763 -
Adu06g00872 306 SUPERFAMILY Cyclin-like 201 302 IPR036915 -
Adu06g00872 306 CDD CYCLIN 104 168 IPR013763 -
Adu06g00872 306 Gene3D - 5 177 - -
Adu06g00872 306 SUPERFAMILY Zinc beta-ribbon 4 50 - -
Adu06g00872 306 ProSitePatterns Transcription factor TFIIB repeat signature. 143 158 IPR023486 -
Adu06g00872 306 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 3 306 - -
Adu06g00872 306 Pfam TFIIB zinc-binding 6 47 IPR013137 -
Adu06g00872 306 Gene3D - 202 305 - -
Adu06g00872 306 SUPERFAMILY Cyclin-like 124 169 IPR036915 -
Adu06g00872 306 PRINTS Transcription initiation factor IIB signature 41 54 IPR000812 GO:0006352|GO:0070897
Adu06g00872 306 PRINTS Transcription initiation factor IIB signature 19 39 IPR000812 GO:0006352|GO:0070897
Adu06g00872 306 PRINTS Transcription initiation factor IIB signature 270 284 IPR000812 GO:0006352|GO:0070897
Adu06g00872 306 PRINTS Transcription initiation factor IIB signature 206 224 IPR000812 GO:0006352|GO:0070897
Adu06g00872 306 PRINTS Transcription initiation factor IIB signature 55 76 IPR000812 GO:0006352|GO:0070897
Adu06g00872 306 PRINTS Transcription initiation factor IIB signature 151 170 IPR000812 GO:0006352|GO:0070897
Adu06g00872 306 PRINTS Transcription initiation factor IIB signature 238 254 IPR000812 GO:0006352|GO:0070897
Adu06g00872 306 Pfam Transcription factor TFIIB repeat 198 284 IPR013150 GO:0017025
Adu06g00872 306 Pfam Transcription factor TFIIB repeat 103 168 IPR013150 GO:0017025
Adu06g00872 306 ProSiteProfiles Zinc finger TFIIB-type profile. 2 34 IPR013137 -
Adu06g00872 306 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 3 306 IPR000812 GO:0006352|GO:0070897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00872 K03124 - fve:101305780 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00872 06 10602694 10606220 Adu06g00872 06 10602694 10606220 ECH