Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00854 ATGGCATTTCTAACTCGCCTCCATTCCTTCGCAAGGCCCTTCTCCTCTCTCCTCTCCACCTCGCGCCAGGTCTCTCTCTCTAACACAAAGCTACTGAAACTTCCTAGAAAGAGTGGAGGTAGAGCAATAATGACCAAGATTGGCATGAACATGTGCTCGCTTTCTCCAGCTGTTTCAACTGAAGCCTCAGATTTAGAATTTGAAGTGATCCATGATGATGTCAAAGCAACAGAAAAAGATGATGCACTTCGCTTGGCTGTCTCACAGCTTGCTAATGAGTTTAGTGAGGAATCCATGTTATCTTTGCAGAAGTTTTTCGGTGTGCGCCGCGCTCAAGTGATATCTACGGGCTCCTTGAAGCTTGACATAGCTCTTGGAATGGGAGGATTGCCAAAGGGTAGGATTGTTGAAATTTATGGACGAGAAGCAGCTGGCAAGACAACACTTGCACTTCAAGTTATTAAAGAAGCTCAAAAGCATGGAGGATATTGTGCATATCTTGATGTAGAGAATGCATTGGACGCTTCACTTGTGGAATCAATAGGTGTGAATACCGAAAAACTTCTTGTCTCGCATCCAGATTGTGCTGAAAATGTGTTGAGCATGGTTGATACATTAACGAAAAGTGGAGCTGTAGATGTGATTGTGATTGATAGTGTTGCTGCCCTTCTACCCAAGCGTGAACTTGATCAGTTAGGTGTTAGCACCAAACTAGATTTACAACCCCGACTGATGACCCAAGCACTGCGGAAAATTCAGTATTCATTATCACATTCACAAACTCTTATCATTTTTGTTAATCAGATTAGATTTAGTCCAAAATCAGCTAAGGGATGTGGACCTGCAGAAGAGGTCACTTGTGGTGGAAATGCTTTGAGATTCTATGCTGCTGTTCGATTGAGACTTTCGAGAATGGGATTGATCAAAACTGATGATAAGGTGGAGGGTCTTCGGGTCTGTGTGCAAGTGGCGAAAAATAAGCTAGCACCAGCAGCACTCAAAAAGGCTGAACTAGGCATCAAGTTTGGAGGAGGCTTTTGCCAAGAAGCAGAGGTCTTAGATTTGGCTTGTGAACATGGAATGATTGTAAAAGACGAGGAAAGCTACCTTATAGAAGGAAATACTTTCGATACTAGAAAAGCGGCCGAAGTGTATTTGGCAGAGGATGACAGCGTCTTTGACAAGTTGTCCTATTCAACTGTAAAATTTTCTTCCATATTTTCTATCATTCTCTACTCATTATTAGTGCTACTAATTGCTGGCACGGCCACAACAGAAGCAACAGGTGTATGCTATGGAAACATGGGAAGCAACTTGCCATCGGCACAAGAAGTGGTTGCACTCTACAAACAATATAACATTCCAAGGATGCGAATCTACGCTCCAGACCAGAATGTTCTAGAAGCCCTTCGCGGCTCCAACATCGAGCTCTTCATGGACATTCCAAAGGAAAATCTAGCACCCTTAGCAGCCACCCAGGACAACGCCAACCAATGGGTCCAGCAATACGTAAGAAACTATGGAAATGTGAGGTTCAGATACATCTCCGTTGGAAACGAAGTCAAACCAAATGAAATTTATGCGCAGTATGTGGTGCCCGCCATGAACAACATCCAGAATGCTCTAAATGCTGCTGGACTTGGTAACCAGATCAAGGTTTCCAACACCATTGAGACCGGTGCTTTAGGACAATCCTACCCTCCATCGCAGGGTTCCTTTAATGCTAATTACAGAGCCGCATATCTTGATGGTGTTATAAGGTTCTTGGTGAATAACCGATCACCGTTGCTTGTGAATGTGTACCCTTACTTTAGCTACTTCTTCAACCAAAGAGACATTCGTCTAGACTACGCACTTTTCACCGCTCCTTCTGCTTTGGTCACCGATGGCTCCCTACATTACCAGAACCTCTTCGATGCAATCGTCGACGCCACGTATTCCGCGTTGGAGAAAGCCGGCGGAGGCTCCCTGGAGATAGTTGTGGCGGAAACTGGATGGCCCTCCGACGGCGGTGTGGCCACTTCACTGGACAACGCAAGGACTTATAACACCAAGTTGGTTGAGCATGTGAAGCTTGGGACTCCAAAGAGGCCTGGCAGACCCATTGAGACCTATGTTTTTGCCATGTTTGATGAGAATAATAAGAACCAGTCACCGCCGCCATATACTTATGAGAAATTTTGGGGGCTCTTCCTTCCAAATAAACAGCCCAAGTACCCTATTAATCTCAATTAG 2235 0.4479 MAFLTRLHSFARPFSSLLSTSRQVSLSNTKLLKLPRKSGGRAIMTKIGMNMCSLSPAVSTEASDLEFEVIHDDVKATEKDDALRLAVSQLANEFSEESMLSLQKFFGVRRAQVISTGSLKLDIALGMGGLPKGRIVEIYGREAAGKTTLALQVIKEAQKHGGYCAYLDVENALDASLVESIGVNTEKLLVSHPDCAENVLSMVDTLTKSGAVDVIVIDSVAALLPKRELDQLGVSTKLDLQPRLMTQALRKIQYSLSHSQTLIIFVNQIRFSPKSAKGCGPAEEVTCGGNALRFYAAVRLRLSRMGLIKTDDKVEGLRVCVQVAKNKLAPAALKKAELGIKFGGGFCQEAEVLDLACEHGMIVKDEESYLIEGNTFDTRKAAEVYLAEDDSVFDKLSYSTVKFSSIFSIILYSLLVLLIAGTATTEATGVCYGNMGSNLPSAQEVVALYKQYNIPRMRIYAPDQNVLEALRGSNIELFMDIPKENLAPLAATQDNANQWVQQYVRNYGNVRFRYISVGNEVKPNEIYAQYVVPAMNNIQNALNAAGLGNQIKVSNTIETGALGQSYPPSQGSFNANYRAAYLDGVIRFLVNNRSPLLVNVYPYFSYFFNQRDIRLDYALFTAPSALVTDGSLHYQNLFDAIVDATYSALEKAGGGSLEIVVAETGWPSDGGVATSLDNARTYNTKLVEHVKLGTPKRPGRPIETYVFAMFDENNKNQSPPPYTYEKFWGLFLPNKQPKYPINLN 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00854 744 Gene3D - 109 407 IPR027417 -
Adu06g00854 744 ProSiteProfiles RecA family profile 2. 280 351 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Adu06g00854 744 ProSiteProfiles RecA family profile 1. 110 269 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Adu06g00854 744 SUPERFAMILY (Trans)glycosidases 429 742 IPR017853 -
Adu06g00854 744 PRINTS RecA protein signature 168 197 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu06g00854 744 PRINTS RecA protein signature 240 269 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu06g00854 744 PRINTS RecA protein signature 288 316 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu06g00854 744 PRINTS RecA protein signature 322 351 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu06g00854 744 PRINTS RecA protein signature 202 231 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu06g00854 744 Pfam Glycosyl hydrolases family 17 429 742 IPR000490 GO:0004553|GO:0005975
Adu06g00854 744 ProSitePatterns Glycosyl hydrolases family 17 signature. 657 670 IPR000490 GO:0004553|GO:0005975
Adu06g00854 744 Gene3D Glycosidases 427 744 - -
Adu06g00854 744 PANTHER DNA REPAIR PROTEIN RECA HOMOLOG 2, MITOCHONDRIAL 41 396 - -
Adu06g00854 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 333 IPR027417 -
Adu06g00854 744 SMART AAA_5 132 306 IPR003593 -
Adu06g00854 744 PANTHER RECA 41 396 IPR013765 GO:0003697|GO:0005524|GO:0006281
Adu06g00854 744 ProSitePatterns recA signature. 291 299 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Adu06g00854 744 Pfam recA bacterial DNA recombination protein 82 346 IPR013765 GO:0003697|GO:0005524|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00854 Adu-Chr6 10350402 10357627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00854 417 743 Glycoside Hydrolase AT3G57270 59.756 2.92e-132 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00854 - - aip:107645515 731.48