Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00830 ATGATACCCGAGGAAACTTCGTGGAAGGTGACTGAAGGTCCAAAACATGGAGATCCATTTAAGGCAACCTGCTTCGTCCCTCCTTCCCCTCAATCCTTTTCTTCTTCTTCTTCTTCTTCTTCAAACACTTTCTCTCTATTCCAACACCAACCACCAATGAAGCTCATCAACATCAATCCCAAGAACCTCAAGCTTTCCCCTAAGCGTCTTTTCCGTTCCTCCAAGAAGGACCGTTCCGCTCCCTCCAGATCCGATCCTCCCTCATTCGGATCCTCCGCGTCCTCCTCCGAGGGCTCCACTCACAAGTCCGCTGCCGCCGCTGGTTCCGCCACGCCTACTAGTGTCCTCCCTGATGCTTCTGGCGACTGGTCCATCGAGCTCCACCTCGAGCTCTCACAGGCCTTCCGCCTCATCGACCGCGACGGTGACGGCGTCGTCTCACGCCAGGAGCTTGAGGCGGTTCTGAAGAGCTTGGCGCCGCTGCGATCGGAGGAAGTGGCGGCGATGCTGCGTGAGGTCGACGCTGAGGGCCGTGGATGCATCAGCGTCGAGGAGCTGGTGAGTCGAGTCGGTTCCGTTGGCGATGTTCCCATGACGGAAGAGGATGAGCTGAGGGAAGCATTCGAGGTGTTTGACAGCGACGGCGACGGGCGGATCTCGGCAGAGGAGCTGCTTAGGGTTTTCCATGCGATCGGCGACGAGCGGTGCACGTTAGAGGAGTGCAGGCGCATGATAGAGGGCGTGGATAGGAACCGGGATGGGTTTGTGTGCTTCGAGGACTTTTCTCGTATGATGGAGTTGCAGCAACAGCAACGGTGA 819 0.5739 MIPEETSWKVTEGPKHGDPFKATCFVPPSPQSFSSSSSSSSNTFSLFQHQPPMKLININPKNLKLSPKRLFRSSKKDRSAPSRSDPPSFGSSASSSEGSTHKSAAAAGSATPTSVLPDASGDWSIELHLELSQAFRLIDRDGDGVVSRQELEAVLKSLAPLRSEEVAAMLREVDAEGRGCISVEELVSRVGSVGDVPMTEEDELREAFEVFDSDGDGRISAEELLRVFHAIGDERCTLEECRRMIEGVDRNRDGFVCFEDFSRMMELQQQQR 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00830 272 PANTHER CALCIUM-BINDING PROTEIN CML35-RELATED 61 268 - -
Adu06g00830 272 SMART efh_1 165 193 IPR002048 GO:0005509
Adu06g00830 272 SMART efh_1 203 231 IPR002048 GO:0005509
Adu06g00830 272 SMART efh_1 240 268 IPR002048 GO:0005509
Adu06g00830 272 SMART efh_1 130 158 IPR002048 GO:0005509
Adu06g00830 272 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 61 268 - -
Adu06g00830 272 MobiDBLite consensus disorder prediction 84 115 - -
Adu06g00830 272 ProSitePatterns EF-hand calcium-binding domain. 139 151 IPR018247 -
Adu06g00830 272 Pfam EF-hand domain pair 131 187 IPR002048 GO:0005509
Adu06g00830 272 Pfam EF-hand domain pair 202 265 IPR002048 GO:0005509
Adu06g00830 272 ProSitePatterns EF-hand calcium-binding domain. 212 224 IPR018247 -
Adu06g00830 272 ProSiteProfiles EF-hand calcium-binding domain profile. 236 271 IPR002048 GO:0005509
Adu06g00830 272 MobiDBLite consensus disorder prediction 72 115 - -
Adu06g00830 272 ProSitePatterns EF-hand calcium-binding domain. 249 261 IPR018247 -
Adu06g00830 272 ProSiteProfiles EF-hand calcium-binding domain profile. 199 234 IPR002048 GO:0005509
Adu06g00830 272 Gene3D - 195 272 - -
Adu06g00830 272 Gene3D - 121 191 - -
Adu06g00830 272 MobiDBLite consensus disorder prediction 1 46 - -
Adu06g00830 272 SUPERFAMILY EF-hand 124 266 IPR011992 -
Adu06g00830 272 MobiDBLite consensus disorder prediction 27 46 - -
Adu06g00830 272 CDD EFh 203 265 IPR002048 GO:0005509
Adu06g00830 272 ProSiteProfiles EF-hand calcium-binding domain profile. 126 161 IPR002048 GO:0005509
Adu06g00830 272 CDD EFh 130 190 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00830 64 265 EF-hand Containing Proteins AT2G41410 53.431 2.40e-59 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00830 K13448 - gmx:100815559 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00830 06 10054509 10055715 Adu06g00830 06 10054509 10055715 ECH