Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00812 ATGCATATTCACTACTTTGGTCTTGTAACTCTGCCAATTCCAACACTTTTTAGGATCATTCTTCTTGGTGTTTTGACCCCTTCTAAGTTGCAATTTGGATTTGGTTCTAAGAAGCAGCCACTTGTGAAGTGGGGTAAGTGCGGTGGTGGTGGTGGTGGTTTGAGGGCTAGTAGCAGTGCCCTTCTTGAACTTGTTCCTGAGATCAAGAAAGAGAATCTTGATTTTGAGCTTCCCTTGTATGATTCCTCAAAGGGTGCTGTGGTGGACCTTGCTGTTGTGGGAGGAGGACCGGCAGGGCTCGCCGTGGCGCAGCAGGTTTCTGAGGCAGGGCTCTCTGTTTGTGCCATTGACCCTAACCCTAGGTTGATTTGGCCCAACAATTACGGCGTTTGGGTCGATGAATTCGAGGCCATGGACTTGCTTGATTGCCTTGACACCACTTGGTCTGGTGCTGTTGTCTACATTGATGACAACAAGAAGAAGGATCTTGATAGGCCTTATGGCAGGGTCAATAGGAAGCAATTGAAGTCAAAGATGATGCAGAAATGCATATCAAATGGTGTTAAGTTCCACCAAGCTAAAGTCATCAAGGTTATTCATGAGGATGCCAAATCTTTGTTGATTTGTAATGATGGTGTCACGGTTCAGGCTACCGTGGTTCTTGATGCAACTGGCTTTTCCAGATGCCTTGTTCAGTATGATAAACCTTATAATCCCGGTTACCAGGTTGCTTATGGAATCTTGGCTGAGGTTGATGAACATCCATTTGATGTGGATAAAATGCTTTTCATGGATTGGAGAGATTCCCATCTGGATGGGGACATGGTGCTGAAGGAAAGGAATAGCAGAATTCCCACCTTCCTATATGCCATGCCCTTTTCATCCAATCGGATATTTCTTGAAGAAACCTCTCTTGTTGCGCGGCCAGGGTTACGTATGGATGATATACAGGAAAGAATGGTTGCAAGGTTGAAACACTTGGGAATTAGAGTGAAGAGCATTGAAGAAGATGAGCACTGTGTCATTCCCATGGGTGGTCCCCTCCCAGTTCTCCCCCAAAGAGTTGTTGGAATCGGCGGGACTGCAGGGATGGTGCATCCTTCAACTGGGTATATGGTAGCAAGGACTCTCGCCGCAGCTCCCATTGTTGCTAATGCCATTGTGCAAAGTCTTGGTTCCGACAGAGGTCTTTTGGGAGCCGATATATCCTCCCGAGTGTGGAAAGATTTATGGCCGATCCAGAGGCGGCGGCAGAGGGAGTTCTTCTGCTTTGGTATGGACATCTTGCTCAAGCTTGATTTACCAGGAACAAGGAGATTTTTCGATGCATTTTTCGATCTAGAACCTCGTTACTGGCATGGATTCTTGTCATCGAGATTGTTTCTCCCTGAACTCTTTTTTTTTGGGCTCTCTCTATTTTCCTATGCTTCCAATACATCTAGATTAGAGATTATGGCAAAGGGGACTCTTCCTTTGGCAAACATGATCAACAACTTGTTAAAAGATACAGAATAA 1515 0.4561 MHIHYFGLVTLPIPTLFRIILLGVLTPSKLQFGFGSKKQPLVKWGKCGGGGGGLRASSSALLELVPEIKKENLDFELPLYDSSKGAVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDDNKKKDLDRPYGRVNRKQLKSKMMQKCISNGVKFHQAKVIKVIHEDAKSLLICNDGVTVQATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVDEHPFDVDKMLFMDWRDSHLDGDMVLKERNSRIPTFLYAMPFSSNRIFLEETSLVARPGLRMDDIQERMVARLKHLGIRVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIVANAIVQSLGSDRGLLGADISSRVWKDLWPIQRRRQREFFCFGMDILLKLDLPGTRRFFDAFFDLEPRYWHGFLSSRLFLPELFFFGLSLFSYASNTSRLEIMAKGTLPLANMINNLLKDTE 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00812 504 SUPERFAMILY FAD/NAD(P)-binding domain 88 471 IPR036188 -
Adu06g00812 504 PANTHER UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL 50 504 - -
Adu06g00812 504 TIGRFAM carotene-cycl: lycopene cyclase family protein 89 484 IPR010108 GO:0016117|GO:0016705
Adu06g00812 504 Pfam Lycopene cyclase protein 89 481 - -
Adu06g00812 504 PANTHER LYCOPENE BETA CYCLASE, CHLOROPLASTIC 50 504 - -
Adu06g00812 504 Gene3D - 86 428 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00812 Adu-Chr6 9786990 9788719 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00812 K06443 - gmx:100783830 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00812 06 9786990 9788719 Adu06g00812 06 9786990 9788719 ECH