Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00784 ATGGCGTTTGCTTCAAACTCGGTTCTGAAAACGCTGAGGCTGAAGAATCCAAAGCTGGTGCTTTTGGAATCATGCAGCAACCTGATCGACCTCACAATCGTCCACGCCCACATGCTCCGAACCCACTTCTTCTTCGACGTCTTTGCCGTCAGTCGCCTCATCGCTCTCTGCACAGACTCCAACAAGAACCTTCTCCACTACGCCATAAGGCTATTCCCCCAAATCGAAAACCCCAACCTATTCATCTTGAACGCCCTCATACGAGGTTGTTCCACCAGCGATGACCCCGCTGCTTCCTTTCGCTATTACATCCAATCGCAGCGCATTGGTCTCTTGCCTGATAACATCACTTACCCATTTCTGGTTAAGGCTTGTGCTCAACTTGAGAATGCTGTTATGGGCACGCAAGCACATGGTCAAATCATAAAGCATGGATTTGAACGCGATTGCTATGCCCAGAACTCCCTCGTTCATATGTATGCCACTGTTGAGGATTCAAAGTCTGCAAGATGCGTTTTTGAAGAGATTTCTGGGTTTGATGTGGTGTCTTGGACTTCCATGATTGCTGGGTACCATAAAGCGGGGGATGTTGACTCTGCACGCGAACTGTTTGATATAATGCCCGAGAGAAATTTGGTGACTTGGAGCACTATGATTAGTGGGTATTCCCGAAACAATAGGTATGATAAGGCTGTTGAGCTGTTTCGTGTTCTTCGGAGTGAAGGGGTGGTGGCTAATGAGCCTGTCATGGTGGGGGTGATATCCGCTTGTGCTCATCTGGGTGCTCTTGCTATGGGGAAGGAAGCTCATGAGTATGTGGTTATGAATGGCTTGTCTTTGAATCTGATTCTTGGGACAGCTCTTGTTGACATGTATGCGAGATGTGGAAACATTGCGAAAGCTATTCAGGTTTTTGAGCAGTTGGCCGAGAAGGACGCACTTTGTTGGACAGCTTTGATTGCTGGACTAGCCATGCACGGCCATGCAGAGAAAGCGCTTTGGTATTTTTCGGAAATGGTGAAATCCGGGCTAGTTCCGTGGGACATTACATTTACGGCGGTGTTGACAGCTTGCAGCCATGGAGGATTGGTAGATAGAGGCCTAGAAATATTTGGGAGCATGAAACATGATCATGGAATTGAGCCAAGATTGGAGCATTATGGATGTATGGTTGACCTACTTGGCCGTGCAGGGAAGTTGGCGGAGGCGGAGAAATTTGTTCTTGAAATGCCCATAAAGCCGAATGCTCCGATATGGGGAGCATTGCTAGGAGCTTGCCGGATTCACAGAAATGCAGAGGTTGGGGAGAGAGTTGGAAAGATTTTGATAGAGATGCAACCAGAACACAGTGGTTACTATGTGCTGCTTTCAAACATATATGCTCGCACAAACAAGTGGAGAGATGTTACCATTATGAGAGAAATCATGAAGGAAAAAGGAGTAAGAAAGCCTCCTGGGTATAGTCTCATTGAGGTAGATGGAAAAGTTCATGAATTTACAATTGGAGATAAATCACACCCAGAAATCGAGAAAATAGAGAGAATATGGGAAGATATACTGCAAAAAATAAGGCTGGCAGGATACATTGGAAATACTGATGAAGCTTTGTTTGACATAGATGAGGAAGAAAAGGAAGATGCACTTAACAGGCATAGTGAGAAGCTGGCAATTGCATATGGAATTATGAAGATTCGAGCCCCTTCACCGATTCGGATTGTGAAAAACTTGCGGGTCTGTGAAGATTGTCACACTGCTACAAAGTTTATTTCAAAGGTTTTCCAAGTAGAGTTGATTGTGAGAGATCGAAACCGATTCCATCACTTTAAAGAAGGCACGTGTTCTTGTATGGATTACTGGTGA 1860 0.4543 MAFASNSVLKTLRLKNPKLVLLESCSNLIDLTIVHAHMLRTHFFFDVFAVSRLIALCTDSNKNLLHYAIRLFPQIENPNLFILNALIRGCSTSDDPAASFRYYIQSQRIGLLPDNITYPFLVKACAQLENAVMGTQAHGQIIKHGFERDCYAQNSLVHMYATVEDSKSARCVFEEISGFDVVSWTSMIAGYHKAGDVDSARELFDIMPERNLVTWSTMISGYSRNNRYDKAVELFRVLRSEGVVANEPVMVGVISACAHLGALAMGKEAHEYVVMNGLSLNLILGTALVDMYARCGNIAKAIQVFEQLAEKDALCWTALIAGLAMHGHAEKALWYFSEMVKSGLVPWDITFTAVLTACSHGGLVDRGLEIFGSMKHDHGIEPRLEHYGCMVDLLGRAGKLAEAEKFVLEMPIKPNAPIWGALLGACRIHRNAEVGERVGKILIEMQPEHSGYYVLLSNIYARTNKWRDVTIMREIMKEKGVRKPPGYSLIEVDGKVHEFTIGDKSHPEIEKIERIWEDILQKIRLAGYIGNTDEALFDIDEEEKEDALNRHSEKLAIAYGIMKIRAPSPIRIVKNLRVCEDCHTATKFISKVFQVELIVRDRNRFHHFKEGTCSCMDYW 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00784 619 PANTHER PENTATRICOPEPTIDE (PPR) REPEAT PROTEIN 82 592 - -
Adu06g00784 619 Gene3D Tetratricopeptide repeat domain 18 178 IPR011990 GO:0005515
Adu06g00784 619 Gene3D Tetratricopeptide repeat domain 286 516 IPR011990 GO:0005515
Adu06g00784 619 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 211 245 IPR002885 -
Adu06g00784 619 Pfam E motif 429 491 IPR046848 -
Adu06g00784 619 Pfam DYW family of nucleic acid deaminases 527 619 IPR032867 GO:0008270
Adu06g00784 619 Pfam PPR repeat family 312 359 IPR002885 -
Adu06g00784 619 TIGRFAM PPR: pentatricopeptide repeat domain 315 347 IPR002885 -
Adu06g00784 619 TIGRFAM PPR: pentatricopeptide repeat domain 213 246 IPR002885 -
Adu06g00784 619 TIGRFAM PPR: pentatricopeptide repeat domain 349 382 IPR002885 -
Adu06g00784 619 TIGRFAM PPR: pentatricopeptide repeat domain 182 212 IPR002885 -
Adu06g00784 619 Pfam E+ motif 496 523 IPR046849 -
Adu06g00784 619 Pfam PPR repeat 182 211 IPR002885 -
Adu06g00784 619 Pfam PPR repeat 286 311 IPR002885 -
Adu06g00784 619 Pfam PPR repeat 213 243 IPR002885 -
Adu06g00784 619 Pfam PPR repeat 386 410 IPR002885 -
Adu06g00784 619 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 180 210 IPR002885 -
Adu06g00784 619 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 82 592 - -
Adu06g00784 619 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 312 346 IPR002885 -
Adu06g00784 619 Gene3D Tetratricopeptide repeat domain 179 276 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00784 Adu-Chr6 9413491 9415361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00784 21 619 Glycoside Hydrolase AT3G49170 33.879 1.38e-122 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00784 - - gmx:100797063 1036.56