Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00779 ATGAAATTCGGGTGCTTGTTCACGGAGTATCTGCAGGAAGAGAGGGAGTTGTTGGATGAGAAATGCGCGCACATTGAATATGTGAGGTTGAAGAAAGTTCTCAAGAGCTGCCAGACCTGCAAACCATTGCACTCTTCTTCTTCTTCTTCTTCTCCTTCTCCTTCTCCTTCCCTTGTTTCTGATCTTCCTAGCCACCAATTGTGCCAATGTCAATCCTGCCCAGTGTGTGATCAGAAGTTCTTCTCAGAGCTGATGAAGGAAGCATCAGACATAGTAGGGTTCTTCGGTTCAAGGGTTAAGCATCTTCTTGATCTTCATGTTGCGTCTGGAATGCAGAGATATGTATTGCGCCTGCGACAGTGCTTTAAAAATGATAGGCAAGCCCTCGCACAAGAAGGGAGAATTTTAATTGAGTACATTGCAATGAATGCTATTGCCATGAGGAAAATACTTAAGAAATATGATAAAGTTCACAGCTCTGTGAATGGAAAGAATTTCAAATCTAAGATGCACACTGAGCACATTGAACTTTTACACACACCTTGGCTAATTGAATTGGGTGCTTTTTATCTGAATTCTAGTGGACGAGATTGTTGTGAACTCAATGGAGTGTATGGTCACTTTAAGTGTGATCTAAATGTTAGTGACGCTGTAATGACGCTGATTCTTCCAGATTCTATCAAGCTCGAGTATAATCTAACTTGCGCAATATGTCTGGATTTAGTTTTCAACCCCTATGCTTTGGGTTGTGGTCATATCTTCTGCAAGTCATGTGCCTGTTCAGCTGCCTCTGTGATGATGTTCCAAGGCTTTAAAGCTGCAAGTCCTGAGTCTAAGTGTCCCATATGCAGAGAGGATGGAGTTTATTCTAAGAGTGTACGCATGTTAGAACTTGGTCTACTAATGAAAAGAAGGTACAATGATTACTGGAAAAAGAGGCTACTTAGCGAACGAAACAACATGGTGAAGCAATCCAAAGAATACTGGAATATGCAGTCTGCATATGCACTTGGATTACACTAG 1023 0.4154 MKFGCLFTEYLQEERELLDEKCAHIEYVRLKKVLKSCQTCKPLHSSSSSSSPSPSPSLVSDLPSHQLCQCQSCPVCDQKFFSELMKEASDIVGFFGSRVKHLLDLHVASGMQRYVLRLRQCFKNDRQALAQEGRILIEYIAMNAIAMRKILKKYDKVHSSVNGKNFKSKMHTEHIELLHTPWLIELGAFYLNSSGRDCCELNGVYGHFKCDLNVSDAVMTLILPDSIKLEYNLTCAICLDLVFNPYALGCGHIFCKSCACSAASVMMFQGFKAASPESKCPICREDGVYSKSVRMLELGLLMKRRYNDYWKKRLLSERNNMVKQSKEYWNMQSAYALGLH 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00779 340 SUPERFAMILY RING/U-box 227 286 - -
Adu06g00779 340 SMART ring_2 235 283 IPR001841 -
Adu06g00779 340 Pfam RING-type zinc-finger 235 281 IPR027370 -
Adu06g00779 340 ProSiteProfiles Zinc finger RING-type profile. 235 284 IPR001841 -
Adu06g00779 340 CDD SPX_BAH1-like 2 164 - -
Adu06g00779 340 ProSitePatterns Zinc finger RING-type signature. 250 259 IPR017907 -
Adu06g00779 340 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1-LIKE-RELATED 1 337 - -
Adu06g00779 340 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 221 335 IPR013083 -
Adu06g00779 340 ProSiteProfiles SPX domain profile. 1 168 IPR004331 -
Adu06g00779 340 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 337 IPR033326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00779 Adu-Chr6 9360666 9363711 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00779 K16275 - gmx:100781704 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00779 06 9360666 9363711 Adu06g00779 06 9360666 9363711 ECH