Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00759 ATGCTGAGCGTGGTGCGAGTGCACCTCCCTTCCGATATTCCCATCGTAGGATGTGAGTTAACACCTTATGTGCTCCTCCGCCGCCCTGACAGGACCGTTACCACCGATGATGTTTCCGAGATCAACCCCTTAGATGGCCATTTCTTGCGTTACAAGTGGTATCGTGTACAAAGTGATAAAAAAGTTGCTGTCTGTAGCATACATCCATCCGAGCAGGCCACACTGCAGTGCCTAGGTTGTGTTAAGGCTAAAATACCTGTTGCCAAAAGTTACCATTGCACTCCAAAGTGTTTTTCAGATGCATGGCAGCATCATCGTGTCTTACATGACCGTGCTGCAAGCGCAGTTAATGACAACGGAAATGAAGAGGAGGAGTTATTTGGGCGATTTAATAATTCTGGTTCTGGATCTTCCAATACCACCTTATCTGCCTCTGCTTCAAGTGCTAGCCTGACAAATGGAGCTGCACCTGTGTATCCGGCAGCAGTTACACAACGAAGTGGTGGTGAAACGTGGTTTGAAGTTGGACGTTCTAAGACATACACCCCTACTGCTGATGACATTGGTCATGTACGTCGAATGATACCTGTTGATGGGATGGGGCATTTAGATGCAGAAGGGCGTATAACATCTTCGGGATCTTTTACGGTTCTATCATACAACATATTGTCTGATTCATATGCCTCAAGTGAATTATACAATTACTGCCCTTCATGGGCTCTTTCGTGGCCTTATCGCCGGCAAAATTTGTTACGAGAAATAGTTGGTTACCGTGCTGATATTATTTGTCTTCAGGAGGTTCAAAGTGATCATTATGAGGAATTTTTTGCCCCTGAACTGGATAAACATGGTTATTATGGTCTTTACAAGAAAAAAACAAATGAGGTATTCCTTGGTAATGCCAATACAATTGATGGTTGTGCGACATTTTTTCGTAGAGACAGATTTTCACATGTGAAAAAATACGAGGTTGAATTTAATAAGGCTGCACAGTCATTAACAGATGCAATGATTCCAACCTCTCAGAGGAAAACTGCCTTGAATCGGCTGGTTAAGGATAATGTTGCACTAATAGTTGTACTAGAAGCAAAGGTAAACAATCAGCCTGTTGACAATCCTGGGAAAAGACAGCTTCTTTGTGTGGCAAATACACATGTCAATGTGCATGACGATTTAAAGGATGTCAAACTCTGGCAGGTGCATACACTTTTAAAAGGATTGGAGAAAATCGCTGCCAGTGCGGACATTCCAATGTTGGTTTGTGGAGACTTTAACTCAGTTCCAGGAAGTGCTCCTCATTCTCTTCTTGCAATGGGAAAAGTAGATCCTTCACATCCTGACTTAGCTGTTGACCCACTTACTATATTGCACCCTCGTACCAAGTTGGTTCACCAATTGCCACTGGTCAGTGCATATTCATCTTTTGCAAGAACAATTGGTGTTGGGTATGAGCAGCATAGACGGAGATTGGACAGCACAACAAATGAACCTTTATTCACCAATGTCACTAGAGATTTTATTGGATCTCTAGATTACATATTCTACACAGCGGATTCCTTGGTTGTGGAGTCGTTGTTGGAGCTATTGGACGAGGAAAGTTTGAGGAAGGATACAGCTCTTCCTTCACCTGAGTGGTCCTCAGATCATATAGCTCTCTTAGCTGAGTTCCGCTGCTGCAAAAATAGATCTAGGCGCTGA 1698 0.4329 MLSVVRVHLPSDIPIVGCELTPYVLLRRPDRTVTTDDVSEINPLDGHFLRYKWYRVQSDKKVAVCSIHPSEQATLQCLGCVKAKIPVAKSYHCTPKCFSDAWQHHRVLHDRAASAVNDNGNEEEELFGRFNNSGSGSSNTTLSASASSASLTNGAAPVYPAAVTQRSGGETWFEVGRSKTYTPTADDIGHVRRMIPVDGMGHLDAEGRITSSGSFTVLSYNILSDSYASSELYNYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYEEFFAPELDKHGYYGLYKKKTNEVFLGNANTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAMIPTSQRKTALNRLVKDNVALIVVLEAKVNNQPVDNPGKRQLLCVANTHVNVHDDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHSLLAMGKVDPSHPDLAVDPLTILHPRTKLVHQLPLVSAYSSFARTIGVGYEQHRRRLDSTTNEPLFTNVTRDFIGSLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNRSRR 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00759 565 CDD Deadenylase_CCR4 217 558 - -
Adu06g00759 565 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 34 192 - -
Adu06g00759 565 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 192 560 - -
Adu06g00759 565 SUPERFAMILY DNase I-like 210 559 IPR036691 -
Adu06g00759 565 Gene3D Endonuclease/exonuclease/phosphatase 192 564 IPR036691 -
Adu06g00759 565 Pfam Endonuclease/Exonuclease/phosphatase family 218 549 IPR005135 GO:0003824
Adu06g00759 565 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 1-LIKE 34 192 - -
Adu06g00759 565 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 1-LIKE 192 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00759 Adu-Chr6 9213134 9218421 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00759 K12603 - gmx:100808935 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00759 06 9213134 9218421 Adu06g00759 06 9213134 9218421 ECH