Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00730 ATGATGGTGATGATGATGAGTTTCGGAAATCAGCGCAACGAGTTCATGAAGGAACCCCTTAATCTTCTTGGAGCTGATTCCGCCATGCATTTAGAAAAGAAAGTGCCACATATCATAATATCTCTCTCTAGCTGGAAACAAAGCAAGCAAAAAATCATGCTGAGAATTGGTTTAAGTGAAAACGGTTCCTATTCAAGGGCTTTGTTTGGAGAGAGTTTCCACAGGTTGTTGTCTACTCACACTGGAAGGAAGCTACAAGATAAGGTAGCACTGATAACTGGGGCAGCTAGTGGAATAGGAAAAGCTACAGCAACCAAATTTATCAATAATGGTGCCAGAGTTATTATTGCAGATATCCAACAAAAACTTGGTCAAAAAACCGCAAATGAACTAGGGCCTAATGCCAGTTTTATAACATGTGATGTCACAAAAGAATCAGACATATCCAATGCTGTTGATTTTGCAATTTCTGAACACAAACAGCTTGATATCATGTTCAACAATGCAGGGATAGCATGTAGAACTCCTCCAAGTATTGTGGACTTAGACATGACAGTATTTGACAAAGTCATGAAGATAAACGTTGGCGGGCTTGTGGCCGGTATCAAGCATGCAGCACGAGTTATGATCCCGCATGGAACGGGCTCGATTCTCTGCACAGCAAGTATCACTGGTGTGATGGGAGGGATGTCACAACACACATATTCAATATCGAAGTGTGCTGTTATAGGTACTGTTAAATCCATGGCTTCAGAGCTATGCAGGCATGGAATAAGAGTGAATTGCATATCACCTTTTGCAATTCCTACTACTTTTGTTATGGAGGAGATGAATCTGTTGTATCCAAATGTTGATGCTCAGAGACATATGGAAATTGTTCATAATGCTGGTGTTCTGAAGGGAGCAAATTGTGAACCAAATGATATTGCTAATGCTGCCCTTTTTCTTGTATCTGATGATGCTAAGTATGTTAGTGGTCATAATTTGGTTGTGGATGGAGGTTTTACATCCTTCAAGAATTTGGATTTTCCTGCACCAGATCAAGTGCAGTAG 1053 0.4046 MMVMMMSFGNQRNEFMKEPLNLLGADSAMHLEKKVPHIIISLSSWKQSKQKIMLRIGLSENGSYSRALFGESFHRLLSTHTGRKLQDKVALITGAASGIGKATATKFINNGARVIIADIQQKLGQKTANELGPNASFITCDVTKESDISNAVDFAISEHKQLDIMFNNAGIACRTPPSIVDLDMTVFDKVMKINVGGLVAGIKHAARVMIPHGTGSILCTASITGVMGGMSQHTYSISKCAVIGTVKSMASELCRHGIRVNCISPFAIPTTFVMEEMNLLYPNVDAQRHMEIVHNAGVLKGANCEPNDIANAALFLVSDDAKYVSGHNLVVDGGFTSFKNLDFPAPDQVQ 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00730 350 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 73 342 - -
Adu06g00730 350 PRINTS Glucose/ribitol dehydrogenase family signature 89 106 IPR002347 -
Adu06g00730 350 PRINTS Glucose/ribitol dehydrogenase family signature 160 171 IPR002347 -
Adu06g00730 350 PRINTS Glucose/ribitol dehydrogenase family signature 256 273 IPR002347 -
Adu06g00730 350 PRINTS Glucose/ribitol dehydrogenase family signature 299 319 IPR002347 -
Adu06g00730 350 PRINTS Glucose/ribitol dehydrogenase family signature 235 254 IPR002347 -
Adu06g00730 350 PRINTS Glucose/ribitol dehydrogenase family signature 209 225 IPR002347 -
Adu06g00730 350 Gene3D - 76 342 - -
Adu06g00730 350 Pfam Enoyl-(Acyl carrier protein) reductase 94 336 - -
Adu06g00730 350 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 86 336 IPR036291 -
Adu06g00730 350 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 73 342 - -
Adu06g00730 350 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 171 IPR002347 -
Adu06g00730 350 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 235 254 IPR002347 -
Adu06g00730 350 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 215 223 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00730 Adu-Chr6 8660266 8663323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00730 83 337 Miscellaneous Gene Families AT4G05530 28.517 5.34e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00730 - - gmx:100814306 491.5