Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00681 ATGGCTGTAGTTGTAGTTGGAGTTGGTGTGCAGCAACAGTTTTTGTGTTCCTCTGAATCAAAGTGGAGCATTCCAACTACGCCATGCAATCCCCTTACCAGCTCCATCCTCATACGCCCATTCAAAAAGATTCAATTTTCAGTCATTTCATGCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCGAAGCTGAAACTCAAACTGCTGAATCTTGCGTCAATTTGGGTCTTCAGCTCTTCTCCAAAGGAAGGGTTAAGGATGCTTTAGCCCAGTTTGAAACAGCGCTTACCTTGAATCCCAATCCTGTGGAGGCCCAAGCTGCTTTCTACAACAAAGCTTGCTGCCACGCATACAGAGGGGAAGGAAAGAAAGCTGCCGATAGTCTCCGTATTGCTTTGAGGGAATACAACCTAAAATTTGGTACAATTCTCAATGATCCAGACTTGGCCTCTTTTAGAGCTTTGCCTGAGTTCAAAGAACTACAAGAAGAGGCCAGGATAGGTGGGGAAGATATTGGCAACAGTTTCCGGAGAGATCTAAAACTTATTAGTGAAGTTCAGGCACCATTTCGTGGGGTTAGGAGGTTTTTTTATGTGGCATTCACAGCAGCTGCAGGAATATCATTGTTCTTCACTCTACCCAGGCTAATCCGTGCAATTCAAGGTGGTGATGGTGCTCCTGATCTACTGGAAACTGCAGGGAATGCTGCCATTAACATTGGAGGCATTGTTGCTTTTGTGGCATTATTTTTTTGGGACAATAAAAAGGAGGAGGAGCAGATTGAACAAATATCTCGAGATGAGACACTATCAAGGCTGCCTTTGCGCTTAACAACTAATCGTGTAGTTGAACTTGTTCAGCTACGGGACACAGTTAGGCCGGTTATATTAGCTGGGAAAAAAGAAACAGTATCTTTGGCTTTGCAAAGAGCAGAACGATTTCGCACTGAGCTCGTTAGACGTGGTGTCCTGTTAGTTCCTGTCATATGGGGAGAAGGTAGGGAAACCAAAACAAAAACAAAAATTGAGAAGAAAGGTTTTGGTCGTCCACAAAAGGCTGCTGAAGCTCTTCCGTCCATTGGGGTAAGATTCACATCACCTTTGCCTTCACGGATCTTTCTCTTCATCTAA 1131 0.4403 MAVVVVGVGVQQQFLCSSESKWSIPTTPCNPLTSSILIRPFKKIQFSVISCSSSSSSSSSSSEAETQTAESCVNLGLQLFSKGRVKDALAQFETALTLNPNPVEAQAAFYNKACCHAYRGEGKKAADSLRIALREYNLKFGTILNDPDLASFRALPEFKELQEEARIGGEDIGNSFRRDLKLISEVQAPFRGVRRFFYVAFTAAAGISLFFTLPRLIRAIQGGDGAPDLLETAGNAAINIGGIVAFVALFFWDNKKEEEQIEQISRDETLSRLPLRLTTNRVVELVQLRDTVRPVILAGKKETVSLALQRAERFRTELVRRGVLLVPVIWGEGRETKTKTKIEKKGFGRPQKAAEALPSIGVRFTSPLPSRIFLFI 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00681 376 Pfam Low psii accumulation1 / Rep27 177 254 IPR021883 -
Adu06g00681 376 SUPERFAMILY TPR-like 66 135 IPR011990 GO:0005515
Adu06g00681 376 SMART tpr_5 69 102 IPR019734 GO:0005515
Adu06g00681 376 ProSiteProfiles TPR repeat profile. 69 102 IPR019734 GO:0005515
Adu06g00681 376 Gene3D Tetratricopeptide repeat domain 51 155 IPR011990 GO:0005515
Adu06g00681 376 Pfam Tetratricopeptide repeat 69 101 IPR013105 -
Adu06g00681 376 PANTHER PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTIC 41 349 - -
Adu06g00681 376 PANTHER PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTIC 41 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00681 Adu-Chr6 8155487 8158519 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00681 - - gmx:100784188 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00681 06 8155487 8158519 Adu06g00681 06 8155487 8158519 ECH