Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00624 ATGGCAGTCACTTCTCCCTCTCTTACCGCTACAGAAAAGAAGCACTGGTGGCTCACCAACCGGAAGATTGTTGACAAATACATAAAGGACGCAAGGAGTCTCATTGCGACGCAAGAACAGAGCGAGATCGCCTCGGCGCTCAACCTTCTAGACGCTGCTCTGGCGATATCACCGAGGCTGGACCATGCACTCCACCTCAGAGCACGGTGCTTGCTGTACCTGCGGCGGTACAAGGATGTCGCCGATATGCTTCAGGACTACATTCCCAGCTTGAAGATCGCCAGTGATGCTGATTCAAGTTCTGTTTCCTCTTCTTCCTCTGATGGGTCTTCCAGGGAAGGAGTGAAGCTTCTGTCCCCTGAGGAACCCGTGAGGGACCAAACGTTCAAGTGCTTCTCCGTTTCCGATCTGAAGAAGAAGGTGATGGCTGGACTCTGTAAAACCTGCGACAAGGAAGGGCAATGGAGGTACTTGGTTTTGGGTCAAGCGTGCTGCCACTTAGGCCTAATGGAGGACGCAATGGTCCTCCTCCAGACCGGAAAACGCCTCGCCACCGACGCATTCCGACGACAGAGCGTCTGCTGGTCTGATGACAGCTTCTCCTTATCCAGCATTCCCTTCTCCGCCGACTCAAACACTACAAACCCGCCTCCTGCCATTCGCCATTTCTCCAAGATTCTAGACGGTCGCAGGGCAGCACCTCAGGCCTTCCTGGCAGAATGCTACATGCATAGAGCCTCCGCCTACCGCGCTGCCGGCCGCATTGCGGAGTCCATAGCGGACTGCAATCGCACCCTTGCCCTTGATCCTACCTGCATTCCAGCCCTTGACACCAGAGCTTCCCTCTTCGAAGCAATTCGCTGCCTCCCGGATTCTCTCCACGACCTCGAACACCTCAAGCTTTTGTACAATTCAATTCTCAGGGACCGGAAGCTTCCTGGCCCTGCGTGGAAGCGGCGCAATGTGAGGTACAGGGAAATTCCAGGGAAGCTCTGCGCCCTTGCCGTGAAGATTCAAGAGCTGAAGCAGAGGCTGGCTTCAGGGGAGACTGGGAATAACGTAGATTACTATGCTCTCATTGGTGTGAGGCGCGGTTGTTCAAGATCTGAGTTGGAGAGGGCTCATGTGTTGCTCACTCTAAAGCATAAACCCGACAAGGCTACCGGATTCATCGAAAGGTGCGAGCTGGCCGACGACCGAGACCTTGATTGCATCAAGGAGAAGGCCAGGATGTCAGCTTTGTTGCTGTATAGGTTGGTTCAGAAAGGTTACACAAATTTGATGAGTGCCGTCTTAGATGAAGAGGCTGCTGAGAAGCAGAGGAAGAAGCAGGCTGCATTGCATGCAGCTGCACACGCGCACGCACACGCACACACCCCAGTTATGGTGCAACAGAAACCTAAGGACCCTGCTCCTGAATTGAACAATAATAGTATTGAGGTAGATAATTTGGTCACTGATAATATCAGCAGCAATGATTCAATGGAGAGTAACAATAACAAGTCTACAATATCATCATCTACTGTCAATCCTGCAGTTTTTCAAGGTGTTTTCTGTCGCGACCTGGCGGCAGTTGGGACCTTGCTTTCGCAGGTCGGATTCAATAGGCCAATTCCGGTGAAGTATGAAGCATTGAGCTGCTAA 1644 0.5237 MAVTSPSLTATEKKHWWLTNRKIVDKYIKDARSLIATQEQSEIASALNLLDAALAISPRLDHALHLRARCLLYLRRYKDVADMLQDYIPSLKIASDADSSSVSSSSSDGSSREGVKLLSPEEPVRDQTFKCFSVSDLKKKVMAGLCKTCDKEGQWRYLVLGQACCHLGLMEDAMVLLQTGKRLATDAFRRQSVCWSDDSFSLSSIPFSADSNTTNPPPAIRHFSKILDGRRAAPQAFLAECYMHRASAYRAAGRIAESIADCNRTLALDPTCIPALDTRASLFEAIRCLPDSLHDLEHLKLLYNSILRDRKLPGPAWKRRNVRYREIPGKLCALAVKIQELKQRLASGETGNNVDYYALIGVRRGCSRSELERAHVLLTLKHKPDKATGFIERCELADDRDLDCIKEKARMSALLLYRLVQKGYTNLMSAVLDEEAAEKQRKKQAALHAAAHAHAHAHTPVMVQQKPKDPAPELNNNSIEVDNLVTDNISSNDSMESNNNKSTISSSTVNPAVFQGVFCRDLAAVGTLLSQVGFNRPIPVKYEALSC 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00624 547 CDD DnaJ 355 389 IPR001623 -
Adu06g00624 547 MobiDBLite consensus disorder prediction 97 117 - -
Adu06g00624 547 SUPERFAMILY TPR-like 38 285 IPR011990 GO:0005515
Adu06g00624 547 SMART tpr_5 239 272 IPR019734 GO:0005515
Adu06g00624 547 Gene3D DnaJ domain 338 455 IPR036869 -
Adu06g00624 547 Gene3D Tetratricopeptide repeat domain 34 302 IPR011990 GO:0005515
Adu06g00624 547 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 216 - -
Adu06g00624 547 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 218 547 - -
Adu06g00624 547 SUPERFAMILY Chaperone J-domain 351 389 IPR036869 -
Adu06g00624 547 PANTHER - 218 547 - -
Adu06g00624 547 PANTHER - 1 216 - -
Adu06g00624 547 MobiDBLite consensus disorder prediction 97 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00624 Adu-Chr6 7492942 7495394 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00624 - - gmx:100808420 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00624 06 7492942 7495394 Adu06g00624 06 7492942 7495394 ECH
Adu06g00624 06 7492942 7495394 Adu09g00944 09 15811708 15817570 PCT