Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00580 ATGGACCCATGTGCTACTTCAAGTTCAAAACTAGGTAACACCAACAATGCTATTGGCTTTGGGGAACACTCTGACTCTCAGATCCTCACCATCATGCGCTCTAACGACGTCGCCGGCCTCCAAGCCACCACCCACCACGGCATCTGGTTCACTGTCCCTCCTGACCCGCCTCACTTCTTCGTCATGGTCGGCGATGCCCTCCAGGTTTTTACAAATGGAAGGTTTAGAAGTGTGAGACACAGGGTGCTGACTAACACACTGAAGGCAAGGATGTCAATGATGTACTTCGGAGCACCGCAACTAAATTGGTGGATCACTCCGCTGCCGGAGATAGTTTCACCACCGCAAAACCCAAGTCGGTATAAGCCCTTCACATGGGGTCAGTACAAGAAAGCTGTATACTCTCGTAGACTTGGGGACTCTCGGCTTGACCAGTTTAAGGTTCACCATAATACCCCTTATTAG 465 0.5054 MDPCATSSSKLGNTNNAIGFGEHSDSQILTIMRSNDVAGLQATTHHGIWFTVPPDPPHFFVMVGDALQVFTNGRFRSVRHRVLTNTLKARMSMMYFGAPQLNWWITPLPEIVSPPQNPSRYKPFTWGQYKKAVYSRRLGDSRLDQFKVHHNTPY 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00580 154 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 4 107 IPR005123 -
Adu06g00580 154 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 6 13 149 - -
Adu06g00580 154 Gene3D - 2 152 IPR027443 -
Adu06g00580 154 SUPERFAMILY Clavaminate synthase-like 13 140 - -
Adu06g00580 154 Pfam 2OG-Fe(II) oxygenase superfamily 15 97 IPR044861 -
Adu06g00580 154 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 13 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00580 Adu-Chr6 6954537 6955582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00580 18 148 Glycosyltransferase AT5G59530 36.296 3.45e-20 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00580 K04125 - gmx:100777233 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00580 06 6954537 6955582 Adu06g00580 06 6954537 6955582 ECH
Adu06g00580 06 6954537 6955582 Adu09g00989 09 17633626 17639412 PCT