Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00570 ATGTCTAAACAAAGGTTGGAAGGCAAGGTGGCAATAGTGACCGGAGGAGCAAGTGGAATAGGAGCAGAAGCAGTGAGGGTATTTGTGGAAAACGGTGCGTTTGTAGTTGTAGCAGATGTTCAAGACGAGCTCGGTCACCTCCTTGCAAGTTCCATTGGCTTGTTAGAGAAGGTGAGTTACTGCCACTGCGACATTAGAGACGAGAAACAAGTTGAAGAAACCGTGGCTTTCGCGGTGGAGAAATACGGAAGCCTAGACATCATGTTCAGCAACGCTGGAATTGCAGGCTCTATCTCTAACATACTTGATTTAGATCTGAACGATTTTGACAACGCCATGGCTGTGAATCTTCGCGGAGCAGCAGCGTGCATCAAGCATGCTGCACGTGTCATGGTGGCAAGAAGGACACGTGGATCCATAATATGCACAGCAAGTGTGGCTGCTTCGGTTGGTATTGGCGCAGCTGCTGGTGTTAGTTATACCGCATCCAAACACGGCCTTATAGGACTTGTGCGTTCGGCGTGTGGTGAGCTTGGCGGTTACGGGATCAGAGTGAATTCGGTTTCACCATATGTTGTGGCCACGCCTCTTGTGTGTAGAGCGCTGGATGTGGAGGCAAGTGAAGTTGAAAGTGCTGGTGGTGTTGGTACCAGTTTGCAGGGGATTGTGTTGAAGCCAATACATGTTGCGCAAGCAGCTTTGTTTCTTGCTTCTGATGAATCTGCTTACATTAGTGGACATGATTTGACCGTTGACGGAGGTTTCTTGGCCGTTAATCGCGGTATTGAACTCTCCCTAGCTAGCGTCAAAACTAAATGA 819 0.4872 MSKQRLEGKVAIVTGGASGIGAEAVRVFVENGAFVVVADVQDELGHLLASSIGLLEKVSYCHCDIRDEKQVEETVAFAVEKYGSLDIMFSNAGIAGSISNILDLDLNDFDNAMAVNLRGAAACIKHAARVMVARRTRGSIICTASVAASVGIGAAAGVSYTASKHGLIGLVRSACGELGGYGIRVNSVSPYVVATPLVCRALDVEASEVESAGGVGTSLQGIVLKPIHVAQAALFLASDESAYISGHDLTVDGGFLAVNRGIELSLASVKTK 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00570 272 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 262 - -
Adu06g00570 272 Gene3D - 1 269 - -
Adu06g00570 272 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 257 IPR036291 -
Adu06g00570 272 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 147 175 IPR020904 GO:0016491
Adu06g00570 272 Pfam Enoyl-(Acyl carrier protein) reductase 15 255 - -
Adu06g00570 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 IPR002347 -
Adu06g00570 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 IPR002347 -
Adu06g00570 272 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 179 IPR002347 -
Adu06g00570 272 PANTHER OXIDOREDUCTASE-RELATED 1 262 - -
Adu06g00570 272 PRINTS Glucose/ribitol dehydrogenase family signature 10 27 IPR002347 -
Adu06g00570 272 PRINTS Glucose/ribitol dehydrogenase family signature 83 94 IPR002347 -
Adu06g00570 272 PRINTS Glucose/ribitol dehydrogenase family signature 132 148 IPR002347 -
Adu06g00570 272 PRINTS Glucose/ribitol dehydrogenase family signature 160 179 IPR002347 -
Adu06g00570 272 PRINTS Glucose/ribitol dehydrogenase family signature 181 198 IPR002347 -
Adu06g00570 272 PRINTS Glucose/ribitol dehydrogenase family signature 219 239 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00570 Adu-Chr6 6769338 6770440 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00570 6 254 Acyl Lipid Metabolism Gene Families AT3G55290 30.469 3.85e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00570 - - gmx:100798299 369.007