Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00564 ATGTCTAAGCAAAGGGTTGCAATTGTTACCGGAGGAGCAAGTGGAATAGGAGCAGAAGCAGCGAGGTTATTTGTGGAAAACGGTGCACTTGTTGTTATAGCAGATGTTAACGATGAATTGGGGCTTCAAGTTGCAAGTTCCATTGGCGTAGACAAGGTGAGTTACCATCACTGCGATGTTAGAGACGAGAAACAAGTTGAAGAAACCGTTGCTTTTGCTATCAAGAAATATGGAAGCTTAGATATCATGTTCAGTAACGCTGGAATTGCAGGCTCTCTCTGTAACATACTTGATTATGATTTGAATGACTTTGATAACACAATAGCTGTGAATGTTCGTGGAGCAGCGGCGTGTATTAAGCACGCGGCACGTGTCATGGTGGAAAGAAAGACACGTGGCTCCATAATTTGCACTGCTAGTATAGCTTCTTTGGTTGGTGGCAGTGGAGCTGGTCATGGTTATACCGCATCCAAACATGGTCTTGTGGGTCTTGTGCGTTCGGCGTGTGGTGAGCTTGGAGCTTATGGAATTAGGGTCAATTCGATTTCACCTTATGTTATGGCCACACCTTTGGCATGTGAAGCTCTTGGTATGGAAGCAAGCGAAGTTGAAAGTGCTGGTGTTGCTGGTGCTAATTTGCAGGGGATTGTGTTGAAGCCAATTCATGTTGCACAAACTGCTTTGTTTCTTGCTTCTGATGAATCGGCTTATATTAGTGGACACAATTTGGTCGTTGACGGAGGCTTGTTAGCCGTTAATAGCCCTGTTTCAAAAAAATAA 780 0.441 MSKQRVAIVTGGASGIGAEAARLFVENGALVVIADVNDELGLQVASSIGVDKVSYHHCDVRDEKQVEETVAFAIKKYGSLDIMFSNAGIAGSLCNILDYDLNDFDNTIAVNVRGAAACIKHAARVMVERKTRGSIICTASIASLVGGSGAGHGYTASKHGLVGLVRSACGELGAYGIRVNSISPYVMATPLACEALGMEASEVESAGVAGANLQGIVLKPIHVAQTALFLASDESAYISGHNLVVDGGLLAVNSPVSKK 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00564 259 Gene3D - 2 258 - -
Adu06g00564 259 Pfam Enoyl-(Acyl carrier protein) reductase 11 249 - -
Adu06g00564 259 PRINTS Glucose/ribitol dehydrogenase family signature 127 143 IPR002347 -
Adu06g00564 259 PRINTS Glucose/ribitol dehydrogenase family signature 154 173 IPR002347 -
Adu06g00564 259 PRINTS Glucose/ribitol dehydrogenase family signature 78 89 IPR002347 -
Adu06g00564 259 PRINTS Glucose/ribitol dehydrogenase family signature 6 23 IPR002347 -
Adu06g00564 259 PRINTS Glucose/ribitol dehydrogenase family signature 175 192 IPR002347 -
Adu06g00564 259 PRINTS Glucose/ribitol dehydrogenase family signature 213 233 IPR002347 -
Adu06g00564 259 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 4 256 - -
Adu06g00564 259 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 IPR002347 -
Adu06g00564 259 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 IPR002347 -
Adu06g00564 259 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 IPR002347 -
Adu06g00564 259 PANTHER OXIDOREDUCTASE-RELATED 4 256 - -
Adu06g00564 259 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 141 169 IPR020904 GO:0016491
Adu06g00564 259 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 251 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00564 Adu-Chr6 6724069 6728516 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu06g00564 3 256 Acyl Lipid Metabolism Gene Families AT3G55290 29.630 1.75e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00564 - - gmx:100798299 370.933