Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00560 ATGGTGGAAGAGGAGCATCAGAACTTGAGCAAATGGCGCTTGGAGCGCGGCCCTTACCTTGGAGACATTTCGGCTCTGTGTTTACTTCGCATCCCCAATCACTCTCTTCCTCTTCTTCTAGCTGGTTTAGGATCTGAGATTCTTCTCTACGACTTAGAACTCGCAAAGATTCTGAGATCCTTCTCTGTCTTCCAAGGCATCCGCGTCCATGGCATCGCCACCTCTCAAGACACTCTTCACTCTGTAGTTGCCGTGTTTGGCGAAACGAGGCTCAAGCTTTTCAGCTTCTCATACGACGCCGTTTCTGAGTCCCCGCAGCTGAACCTGATTCAGTTGTTGCCCAAGTTTCCTCACTGGGTTTTGGATGTTTGCTTTCTCACGGGTTGTTTAGCTCATTCCAATGTGGAGAGCCATTTTCTTGCTGTAGGATCTAGCGACAATTCAGTTCACGTTTGGGACATCTCCAACTCTTGTACGGTTCTCAAGGTTCAATCTTCAGTGCGGTGCCTTTTGTACTCGATGCGACTATGGGGTCACAATCTTCAAGCTCTCCGTGTTGCATCTGGCACAATATTTAATGAGATTATTGTTTGGAAAGTGGCCCCTCAGCTTGATAAGTGTTCATCAAGCTTCGGAGAAGACAATGATCGTCAGAGCATTTCATTATGCAATTGCTGTATGTTCAAAGATCAACTTTATGGGGCTGTTCATGTATGTAAACTTATTGGACATGAAGGTTCAATCTTCCGAATAGCATGGTCGTCTTGTGGCTCTAAACTGGTATCTGTCTCTGATGACCGTAGTGCACGTGTCTGGGCAGTTCCTATTGAAGTGGAAGATTTTACGCGGCATGATCCCACTGCCCTTGTCTTATTCGGACATAATGCTCGAGTTTGGGATTGTTGCATTGCTGATCACTTGATTGTCACTGCCAGTGAGGATTGTACGTGTCGTCTATGGGGAGTTGATGGTGAACAACTGCAAGTCATTAAGGAGCACATAGGGAGGGGTATATGGAGATGTATGTATGACCCAAATTCGGCACTTCTCATAACGGCTGGGTTTGACTCAGCTATCAGAGTGCATCAGCCTCATGCTTCTGTATCCAGCGGATTGGCAGCAGCACCAGGCCCTCCTGACAGGGCAGAGACATTTTCCATTTGCATCCCTAATGTGTTGGATCGTATTGGACTCATGGACAGCAAGAGTGAATATGTACGTTGTTTACGTCTTGCCTCTCAGGACAGTCTTTATGTTGCCACAAATCATGGTTTTCTTTACCATGCTAAATTCATTGGTGCAAGAGGTGCTCAGTGGAAGCAACTTGTTCAGGTCAGCAATGGGGCTCAAATTATCTGTATGGATTTATTGTCTAAGGACTCAATTGAACTTGACTGCGGTGCTGACAATTGGGTTGCTATTGGAGATGGTAAAGGAAATATGACAGTTATTGGAGTTACTGATAATGGTTGTACTCCTACAGTGAGACTAAACTTCACCTGGTCAGCTGACATGGAGAGACGGCTCTTGGGTACCTATTGGTGCAAATCTCTGGGATGCAGGTATGTCTTCACAGCTGATCCTAGAGGAACATTGAAACTATGGAGGTTGCCTGATCCCCCACAATCTAGCCTCGCAGGCTCCATGAAGAGTAATAGTGCATCACATATAGCAGATTTCATATCAAATTTTGGAATGCGGATAATGTGTTTGGATGCTTGCGTGGAAGGAGAGATCCTAGTGTGTGGAGATGTACGTGGTAATATGGTTGTGTTCCCTTTGCCAAAGAATCTGGTGCTTGGCACATCATTAGTACAAGAAGGGAAGATAACTCCGGCAAATCATTTCAAAGGGATTCATGGTATATCAAGTGTGTCTAGTGTTTCTGTGACTAAGCTTGGTCATAATCAGCTTGAGATAAGCTCAACCGGAGCAGACGGATGTATATGCTATCTAGAATATGATAGAGATATGCGTACTTTGCAATTCATGGGGTTGAAACAGGTGAAAGAGTTGAGTTTGATTGAAAATGTTTCTGCGAATAACAACTCTGTTGGTACATTATCTGGCGGTTATGCAGCTGGTTTTGCATCAGTTGATTTCATAGTGTGGAACTTAGTTAATGAGAGTAAGGTGGTGAAAATTCCATGCGGTGGATGGCGCCGTCCTCACTCCTACTATCTAGGTGATATACCAGAGAAGGAAAATTGCTTTGCCTTTGTCAAGGATGAAATGATACATATCCATAGACACTGGATTCATGATAAAGGTGAGAAGATATATCCTCAGAGGTTACATTTGCAATTTCATGGGAGAGAGATACATTCCTTGTGCTTTATCTCTGAAGATATACTCCCTGGAGATTCTTATAAGCATACCTTATTTTCTAAATTAAGTTGGATTGCAACTGGATGCGAGGATGGAACTGTGAGATTGACTTTGTACTCTCCAGATATTGAAAATTGGTCCATGTCAAAACTGCTTGGTGAACATGTTGGAGGATCAGCTGTAAGATCAATTAGTTGTGTGTCAAAACTGCATACCTTTTCACCAAGTACTACTGATGTACCCGGTGGAAATGGTGAACTGAATGCTGCTGTTGAGGGTGAAGATAATCTAACCTTACTCATATCTGTGGGTGCAAAGCGTGTGGTAACTTCTTGGCTACTGAAATATCAGAAGCAGAGTGACAAAAATGACCTTTTAATTGATCATCAGTATAATTCAAAAGGAGTTGATCAATTTTTGTCAAGCTTGCCCTCATCAATGACATTCCAGTGGCTTTCTACTGATATGCCAGCAAGATATTCGATTACCCAGAAATATCCGGAAAATGCTCCCGAGAATGTAGTAAGTGCTGCTGAACAAGTTTCTAATACAGAGGTTGATGGTAGACCTGGATCTCTGTTGAATGAAAGGGGAATGATGAACTCAATCAAAGATAAACATGAGGATGACTGGAGATATCTTGCTGTTACTGCTTTTCTTGTTAAATGTGTGGGTTCCAGGATATCTGTTTGTTTTGTTGTTGTTGCCTGTTCAGATGCTACACTTGTGTTACGGTCTTTAGTTTTGCCCTTCCGCCTATGGTTTGATGTTGCTTTGTTAGTTCCCTTACTAGCCCCAGTCTTGTCATTGCAGCATATAATTTTCCCCATATCTAGGCCTTTTAAAGAAAACACTCAATTTGGAAATGCTTATATTGCAATCAGTGGATCTACTGATGGGAGCATTGCTTTTTGGGACCTGACTGATAGTGTTGAAGCTTTTATGCAGAGGATTTCTGTTTGTAATGTAGAGAATTTCTTTGATTGTCAGAAACGCCCACAATCAGGGAGAGGAAGTCAGGGTGGTAGATGGTGGAGATCATTGAGCAGTGGTTTGTCAAAGAAAAGGCAGCCCAGTGATCAGGTAACCTCAAAAGCAAAAGATGAAACCAAAAGCATCTGTCATGCTGACACTGTTAGTGGTGACTCTTCAATAACAAATGGATCCGAAGACAGCAAAATGGGTTGTTCCCAAACCACGCAAACAGCTTTCCCTAAGTCGGAGATTAAAACTGATAATTCCTTGGTGGAAATATGTGAAATACAGCCTCTACGCCTTTTGCAAAATATTCATCAATCTGGAGTCAATTGTCTCCATGTTTCAGAGATAAAAGGTGGCCAAAACAACAATAGTTGCAATGTATATAGTATAGTTAGTGGTGGTGATGATCAGGCACTTCATCATCTTACCGTTGAACTATCACTTAAGTCAACAAATTCAGATAATGGGGTTGTGACTCCAGAAATAAGATATTGGACCTCTGGACCTGAATATGAGGACATAAGTTTTCAAAGTTGGAGCAAGAGTTATGGAATCAGGTTCTTAAATTATGTGAAAATTCCTTCGGCCCACAGCTCTTCAGTCAAAGGTGTGTGGACGGATGGGTCTTGGGTGTTTTCAACCGGACTTGATCAGCGAGTCAGATGCTGGCGACTTCATGACAGTAAACTCGTCGAGCATGCACATCTAATAGTTAGTGTACCAGAGCCAGAAGCATTATCTGCTAGAGCCTGTGTCAGGAACCATTATCAGATTGCTGTTGCTGGCAGAGGGATGCAAATAGTTGACTTTTCAGTATCATAA 4131 0.4275 MVEEEHQNLSKWRLERGPYLGDISALCLLRIPNHSLPLLLAGLGSEILLYDLELAKILRSFSVFQGIRVHGIATSQDTLHSVVAVFGETRLKLFSFSYDAVSESPQLNLIQLLPKFPHWVLDVCFLTGCLAHSNVESHFLAVGSSDNSVHVWDISNSCTVLKVQSSVRCLLYSMRLWGHNLQALRVASGTIFNEIIVWKVAPQLDKCSSSFGEDNDRQSISLCNCCMFKDQLYGAVHVCKLIGHEGSIFRIAWSSCGSKLVSVSDDRSARVWAVPIEVEDFTRHDPTALVLFGHNARVWDCCIADHLIVTASEDCTCRLWGVDGEQLQVIKEHIGRGIWRCMYDPNSALLITAGFDSAIRVHQPHASVSSGLAAAPGPPDRAETFSICIPNVLDRIGLMDSKSEYVRCLRLASQDSLYVATNHGFLYHAKFIGARGAQWKQLVQVSNGAQIICMDLLSKDSIELDCGADNWVAIGDGKGNMTVIGVTDNGCTPTVRLNFTWSADMERRLLGTYWCKSLGCRYVFTADPRGTLKLWRLPDPPQSSLAGSMKSNSASHIADFISNFGMRIMCLDACVEGEILVCGDVRGNMVVFPLPKNLVLGTSLVQEGKITPANHFKGIHGISSVSSVSVTKLGHNQLEISSTGADGCICYLEYDRDMRTLQFMGLKQVKELSLIENVSANNNSVGTLSGGYAAGFASVDFIVWNLVNESKVVKIPCGGWRRPHSYYLGDIPEKENCFAFVKDEMIHIHRHWIHDKGEKIYPQRLHLQFHGREIHSLCFISEDILPGDSYKHTLFSKLSWIATGCEDGTVRLTLYSPDIENWSMSKLLGEHVGGSAVRSISCVSKLHTFSPSTTDVPGGNGELNAAVEGEDNLTLLISVGAKRVVTSWLLKYQKQSDKNDLLIDHQYNSKGVDQFLSSLPSSMTFQWLSTDMPARYSITQKYPENAPENVVSAAEQVSNTEVDGRPGSLLNERGMMNSIKDKHEDDWRYLAVTAFLVKCVGSRISVCFVVVACSDATLVLRSLVLPFRLWFDVALLVPLLAPVLSLQHIIFPISRPFKENTQFGNAYIAISGSTDGSIAFWDLTDSVEAFMQRISVCNVENFFDCQKRPQSGRGSQGGRWWRSLSSGLSKKRQPSDQVTSKAKDETKSICHADTVSGDSSITNGSEDSKMGCSQTTQTAFPKSEIKTDNSLVEICEIQPLRLLQNIHQSGVNCLHVSEIKGGQNNNSCNVYSIVSGGDDQALHHLTVELSLKSTNSDNGVVTPEIRYWTSGPEYEDISFQSWSKSYGIRFLNYVKIPSAHSSSVKGVWTDGSWVFSTGLDQRVRCWRLHDSKLVEHAHLIVSVPEPEALSARACVRNHYQIAVAGRGMQIVDFSVS 1376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00560 1376 Gene3D - 1057 1343 IPR015943 GO:0005515
Adu06g00560 1376 SUPERFAMILY WD40 repeat-like 1068 1334 IPR036322 GO:0005515
Adu06g00560 1376 MobiDBLite consensus disorder prediction 1125 1145 - -
Adu06g00560 1376 SUPERFAMILY WD40 repeat-like 22 201 IPR036322 GO:0005515
Adu06g00560 1376 ProSiteProfiles Trp-Asp (WD) repeats profile. 241 272 IPR001680 GO:0005515
Adu06g00560 1376 SMART WD40_4 234 273 IPR001680 GO:0005515
Adu06g00560 1376 SMART WD40_4 106 153 IPR001680 GO:0005515
Adu06g00560 1376 SMART WD40_4 323 363 IPR001680 GO:0005515
Adu06g00560 1376 SMART WD40_4 494 536 IPR001680 GO:0005515
Adu06g00560 1376 SMART WD40_4 760 814 IPR001680 GO:0005515
Adu06g00560 1376 SMART WD40_4 1290 1327 IPR001680 GO:0005515
Adu06g00560 1376 SMART WD40_4 1196 1246 IPR001680 GO:0005515
Adu06g00560 1376 SMART WD40_4 284 321 IPR001680 GO:0005515
Adu06g00560 1376 Gene3D - 231 426 IPR015943 GO:0005515
Adu06g00560 1376 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 241 272 - -
Adu06g00560 1376 SUPERFAMILY WD40 repeat-like 129 537 IPR036322 GO:0005515
Adu06g00560 1376 Gene3D - 20 230 IPR015943 GO:0005515
Adu06g00560 1376 PANTHER WD REPEAT PROTEIN 16 1375 - -
Adu06g00560 1376 Pfam WD domain, G-beta repeat 239 272 IPR001680 GO:0005515
Adu06g00560 1376 Gene3D - 469 902 IPR015943 GO:0005515
Adu06g00560 1376 SUPERFAMILY WD40 repeat-like 520 843 IPR036322 GO:0005515
Adu06g00560 1376 ProSiteProfiles Trp-Asp (WD) repeats profile. 136 162 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00560 K24737 - gmx:100780968 2029.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu06g00560 06 6690041 6698097 Adu06g00560 06 6690041 6698097 ECH