Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu06g00552 ATGAGAACTCTTGCAAAATTTATTTGTCGTTCTCTTTGTATCTTGCCCAGGCACTTCCAATCAACTCCGCCATTCCCACACCCAATATTCCACCCTCGAATTCCATTTTTCCTACGTTTTTACTCTGCCGAAGTGCAACCTCAACTATCTACGGAGCTCTTGGGCATAATGGAACAGAGACTGTCTGCTATTGAGTACAGGTCTGCCACTCTCAACAATCTTCTCAATCAGCCCGAAATACCACCATCAGAATACGCAAGAGCAAATAAGGAGCTTCGTAAGCTGAGCAGTTCGTTACATCTTATTAACGAGTTGAGGGCTAAACAGAAGGAAATTGATGGCTTGAAGTCACTGGTGGCTGAATGTTCCGATGACAAAGACATGCTTAACATGGCGATAGAGGAAATGGGACAGGCCATAGAGGAAGAACGAAGACTGCAACATTTGCTGTTGAAGTCCTTACTTCCTAAGGATGATGCTGATGAAAGGGACTGCATTTTGGAGGTCAGAGCAGGCACTGGTGGGGAGGAGGCTTCTTTGTTTGCAATGGACATTTTCAAAATGTATGAAAAGTATGCTCACAAGAATGGCTGGAAATTTGTAGTAGTAGATATTGCTCAATCAGATTTTAAAGGATACAAGGAAGCTAGTGCAGCAATTGCAGGAGATGGTGCTTTTGGGAAACTAAAATTTGAAAGTGGAATACATAGAGTACAGAGAGTTCCTGTGACAGAAAAATTAGGACGAGTTCATACCAGTGCTGTTTCTGTCGCAATCCTCCCTCAGGCTGACGAGGTTGATGTTCAATTGAAGAATGAAGACTTAAAAATTGATACCTACAGATCTGGTGGTTCGGGTGGTCAGCATGCAAATACAACAAACAGTGCTGTTAGAATAACTCACATTCCGACTGGGATTACAGTTGCTATACAAGATGAGCGCTCTCAACATCAAAACAAGGCCAAAGCACTTAAAGTACTGTGTGCAAAGCTATTTGAAATGGAAAGGGTCCGAGCTCATAGTACACGATCAAAACTTCGGTCAGAACAGATTGGCAGCGGTGATAGATCTGAACGCATCCGGACATACAACTTTCCTCAAGGTCGTGTCACTGATCATAGAGTTGGTATAACTTATCACTCAATAGATGATGTGATGCAAGGTGAGAATCTTGAGGTATTTATTGATGCTCTTTTATTGCAAGAAGAAATGGATGCAATTGCAACTTTTAGTTCTTCTCAGTAA 1245 0.4209 MRTLAKFICRSLCILPRHFQSTPPFPHPIFHPRIPFFLRFYSAEVQPQLSTELLGIMEQRLSAIEYRSATLNNLLNQPEIPPSEYARANKELRKLSSSLHLINELRAKQKEIDGLKSLVAECSDDKDMLNMAIEEMGQAIEEERRLQHLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAMDIFKMYEKYAHKNGWKFVVVDIAQSDFKGYKEASAAIAGDGAFGKLKFESGIHRVQRVPVTEKLGRVHTSAVSVAILPQADEVDVQLKNEDLKIDTYRSGGSGGQHANTTNSAVRITHIPTGITVAIQDERSQHQNKAKALKVLCAKLFEMERVRAHSTRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSIDDVMQGENLEVFIDALLLQEEMDAIATFSSSQ 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu06g00552 414 Pfam PCRF domain 67 257 IPR005139 GO:0006415
Adu06g00552 414 SUPERFAMILY Release factor 68 402 IPR045853 -
Adu06g00552 414 TIGRFAM prfA: peptide chain release factor 1 59 411 IPR004373 GO:0006415|GO:0016149
Adu06g00552 414 Gene3D - 51 159 - -
Adu06g00552 414 PANTHER LD18447P 40 412 - -
Adu06g00552 414 Gene3D - 264 354 - -
Adu06g00552 414 Pfam RF-1 domain 264 374 IPR000352 GO:0003747|GO:0006415
Adu06g00552 414 PANTHER LD18447P 40 412 - -
Adu06g00552 414 Gene3D - 161 412 - -
Adu06g00552 414 SMART PCRF_a_2 117 232 IPR005139 GO:0006415
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu06g00552 Adu-Chr6 6592078 6594636 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu06g00552 K02835 - gmx:100800412 648.277